Sequence of DPV Tomato spotted wilt virus
Tomato spotted wilt virus RNA segment S, complete sequence.
ACC No: AB190819
Dated: 2004-09-22 | Length: 2991 | CRC: -468206876
!!NA_SEQUENCE 1.0
ID AB190819 standard; genomic RNA; VRL; 2991 BP.
XX
AC AB190819;
XX
SV AB190819.1
XX
DT 22-SEP-2004 (Rel. 81, Created)
DT 22-SEP-2004 (Rel. 81, Last updated, Version 1)
XX
DE Tomato spotted wilt virus RNA segment S, complete sequence.
XX
KW .
XX
OS Tomato spotted wilt virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN [1]
RP 1-2991
RA Kim J., Choi G., Kim J., Ryu K., Choi J.;
RT ;
RL Submitted (20-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL Jae-Hyun Kim, National Horticultural Research Institute, Horticultural
RL Enviroment; Top-dong, Suwon 441-440, Korea: yesan
RL (E-mail:cgmmv@hanmail.net, Tel:82-31-290-6237)
XX
RN [2]
RA Kim J., Choi G., Kim J., Ryu K., Choi J.;
RT "Outbreak of tomato spotted wilt virus in Korea";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2991
FT /db_xref="taxon:11613"
FT /mol_type="genomic RNA"
FT /organism="Tomato spotted wilt virus"
FT /segment="S"
FT CDS 89. .1492
FT /codon_start=1
FT /transl_table=1
FT /product="non-structural protein"
FT /protein_id="BAD51471.1"
FT /translation="MSSSVYESIIQTKASVWGSTASGKAVVDSYWIHELDTGSPLVQTQ
FT LYSDPRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDIDFSINIDDSVLALSVCSNT
FT VNTNGVKHQGHLKVLSPAQLHSIGSTMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS
FT CVKEHTYKVEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL
FT MSAENNIVPNSQAFVKASTDSHFKLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI
FT ACIPNHNSVETALNISVICKHQLPIRKCRTPFELSMMFSDLKEPYNIVHDPSYPQRIVH
FT ALLETHTSFAQVLCNNLQEDVIIYTLNNYELTPGKLDLGERTLNYSEDICKRKYFLSKT
FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSVSVATSLLKLDLSKIKKKESKI
FT SEAYASGSK"
FT CDS complement(2064. .2840)
FT /codon_start=1
FT /transl_table=1
FT /product="N protein"
FT /protein_id="BAD51472.1"
FT /translation="MSKVKLTKESIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQI
FT KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT NPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ Sequence 2991 BP; 958 A; 550 C; 472 G; 1011 T; 0 other;
AB190819 Length: 2991 September 28, 2004 08:49 Type: N Check: 993 ..
1 agagcaattg tgtcagaatt ttattcttaa tcaaacctca cttagaaaat
51 cacaaaactg taataagaac acagtaccaa taaccataat gtcttcaagt
101 gtttatgagt cgatcattca gacaaaagct tcagtctggg gatcaactgc
151 atctggtaaa gcagttgtgg attcttactg gattcatgaa cttgatactg
201 gttccccact agttcaaacc cagctgtatt ctgatccaag aagcaaaagc
251 agctttggct atactgcaaa ggtagggaat cttccctgtg aagaagaaga
301 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta
351 gcatcaatat tgatgactct gttctggcac tatctgtttg ctcaaataca
401 gtcaatacta acggagtgaa acatcaaggt catttgaaag ttttgtctcc
451 tgctcagctc cactctattg gatctaccat gaacagatct gatattacag
501 accgattcca gctccaagaa aaagacataa ttcccaatga cagatacatt
551 gaagctgcaa acaaaggctc tttgtcttgt gttaaagagc atacctataa
601 ggtcgagatg tgctacaatc aagctttggg caaagtgaat gttctatccc
651 ctaacagaaa tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat
701 caagttgaaa gcaacaacag aactgtgaat tctcttgcag tgaaatctct
751 gcttatgtca gcagaaaaca acatcgtgcc taactctcag gcttttgtta
801 aagcttccac tgattctcat ttcaagctga gcctctggct aagagttcca
851 aaggttttga agcagatttc cattcagaaa ttgttcaaag ttgcaggaga
901 tgaaacaaac aaaacatttt atttatctat tgcttgcatt ccaaaccaca
951 acagtgttga gacagcttta aacatttctg ttatttgcaa gcatcagctc
1001 ccaatccgta aatgtagaac tccttttgaa ttatcaatga tgttttccga
1051 tttaaaggag ccttacaaca ttgttcatga tccttcatat cctcagagga
1101 ttgttcatgc tctgcttgaa actcacacat cttttgcaca agttctttgc
1151 aacaacttgc aagaagatgt gatcatctac actttgaaca actatgagct
1201 aactccagga aagttagatc taggtgaaag aaccttaaat tacagtgaag
1251 atatctgcaa aaggaaatat ttcctttcaa aaacacttga atgtcttcca
1301 tctaacacac aaactatgtc ttacttagac agcatccaaa tcccttcctg
1351 gaaaatagac tttgccaggg gagaaattaa aatttctcca caatctgttt
1401 cagttgcgac atctttgtta aagcttgatt taagcaagat caaaaagaaa
1451 gaatctaaga tttcggaagc atatgcttca ggatcaaaat aatcttgccg
1501 tgtccagctt tttctaatta tgttatggtt gtgtctttct ttacttataa
1551 ttatttttct ggtttgtcat ttcttttgga atttctcctg tttaatagga
1601 actataaaac aaaaataaaa taaaataaaa aataaaaatc aaaatgaaac
1651 cgaaatcaaa aaatgaaaca aaaatcaaaa aataaaaaat aaaataaaaa
1701 caacaaaaaa attaaaaaac aaaaaaccaa aaaagatccc gaaaggggca
1751 attttggcca aatttggggt ttgttttgtt tttgtttttt gttttttgtt
1801 ttttattttt tattttttat ttttatttta ttttatttat tttattttat
1851 ttttattttt attttttatt tttatttttt attttatttt atgtttttgt
1901 tgtttttgtt attttgttta tttattaagc acaacacaca gaaagcaaac
1951 tttaattaaa cacacttatt ttaaatttaa cacactaagc aagcacaagc
2001 aataaagata aagaaagctt tatatattta taggttcttt tataatttaa
2051 cttacagctg cttttaagca agttctgcaa gttttgcctg ttttttaacc
2101 ccgaacattt cataaaactt gttaagagtt tcactgtaat gttccatagc
2151 aacacttcct ttagcattag gattgctgga gctaagtata gcagcatact
2201 ctttcccttt cttcacctga tcttcattca tttcaaatgc tttgcttttc
2251 agcacagtgc aaacttttcc taaggcttcc tttgtgtcat acttctttgg
2301 atcgatcccg agatctttgt attttgcatc ctgatatata gccaagacaa
2351 cactgatcat ttcaaagcta tcaactgaag caataagagg taagctacct
2401 cccagcatta tggcaagcct cacagacttt gcatcatcaa gaggtaatcc
2451 ataggcttga atcaaagggt gagaagcaat cttagatttg atagtattga
2501 gattctcaga attcccagtt tcctcgacaa gcctgaccct gattaagcta
2551 tcaagccttc tgaaggtcat gtcagtggct ccaatcctgt ctgaagtttt
2601 ctttatggta attttaccaa aagtaaaatc actttgctta ataaccttca
2651 ttatactctg acgattcttc agaaatgtca gacatgaaat aatgctcatc
2701 ttcttgatct ggtcaaggtt ttccagacaa aaagtcttga agttgaatgc
2751 taccagattc tgattttcct caaattcaag gtctttgcct tgtgtcaaca
2801 aagcaacaat gctttcctta gtgagcttaa ccttagacat gatgatcgta
2851 gaagttgtta tatgctttga ccgtatttaa ctcgaggtgc aaaagtacaa
2901 ctctgtattc cgcagtcgtt tcttagggtt ttaatgtgat gattagtaag
2951 actgagggtt aaggtttgaa taaaattgac acgattgctc t