Sequence of DPV Satsuma dwarf virus
Citrus mosaic sadwavirus CP gene for coat protein, partial cds, segment RNA2-1.
ACC No: AB247637
Dated: 2007-04-21 | Length: 1493 | CRC: 1720535797
ID AB247637; SV 1; linear; genomic RNA; STD; VRL; 1493 BP.
XX
AC AB247637;
XX
DT 21-APR-2007 (Rel. 91, Created)
DT 21-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE Citrus mosaic sadwavirus CP gene for coat protein, partial cds, segment
DE RNA2-1.
XX
KW .
XX
OS Citrus mosaic sadwavirus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sadwavirus.
XX
RN [1]
RP 1-1493
RA Ito T.;
RT ;
RL Submitted (24-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Takao Ito, National Institute of Fruit Tree Science, Department of Citrus
RL Research; Otsu 954, Kuchinotsu, Nagasaki 859-2501, Japan
RL (E-mail:itotaka@affrc.go.jp, Tel:81-957-86-2306, Fax:81-957-86-4268)
XX
RN [2]
RA Ito T., Ito T., Shiotani H., Iwanami T., Ozaki K., Muramoto K.;
RT "Genetic diversity and a heterogeneous population of Citrus mosaic virus
RT within a single citrus tree";
RL J. Gen. Plant Pathol. 73:147-151(2007).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1493
FT /organism="Citrus mosaic sadwavirus"
FT /segment="RNA2-1"
FT /isolate="97032"
FT /mol_type="genomic RNA"
FT /note="synonym: Citrus mosaic virus"
FT /db_xref="taxon:57325"
FT CDS <1. .1227
FT /codon_start=1
FT /transl_table=1
FT /gene="CP"
FT /product="coat protein"
FT /protein_id="BAF56880.1"
FT /translation="GKAAYLGLTASLFSMYNFWKGSYILKVDVLSKGSCAGAISIYVPP
FT PGTSADHYSQSQLDTLPRYELPWRGTGSARFEVENFSWIGWHLTKPQRYVTNEDWFSLN
FT AGVVVVLNQPPTTRTGGSSDIRVIFRIVKFKNLTLKERSTTCDIFAGIKDATYVSPLLD
FT VLDNSISAPASVASDPDITFDATSSVQTNDMLPRSFGAYYAYLLGGAASGKRWHSYVLP
FT ITMGHHRSEIGTSKTGYLHEDLDESVRIRYSLRNPLHILCAAGAYYATDLLFTLVIDGD
FT FSSERAFAQLGLIQTPLMEYYDGYTTDRTLSSEGGYSNQLGVGKSYIQLLVPRRNYRAR
FT SITTDTAALFFETIGSLSVRFTASDKIKGVHLFVEAAGPIDIDGYGRGLDIGHTDKSFV
FT LMPSLRTAA"
XX
SQ Sequence 1493 BP; 373 A; 328 C; 345 G; 447 T; 0 other;
ab247637 Length: 1493 21-APR-2007 Type: N Check: 9455 ..
1 gggaaagctg cttatttagg tttaacggct tccctttttt ccatgtacaa
51 tttttggaag ggaagttaca tacttaaagt ggatgttctt tcaaaaggga
101 gttgtgctgg agctattagc atatatgtgc ctcctccagg cacaagtgca
151 gaccactact ctcagtcgca acttgatact ctcccacgct atgagctacc
201 atggagaggg acgggatccg ccagatttga ggttgaaaat ttttcttgga
251 ttgggtggca cctaactaaa cctcagcgtt atgtaaccaa cgaagattgg
301 ttctctctga atgctggggt ggttgtggtt ctaaaccaac caccgacaac
351 aagaacaggt ggatctagcg acataagggt gattttccgt attgtgaaat
401 tcaaaaatct caccctcaaa gaacgttcca cgacctgcga catattcgcg
451 ggtataaagg atgcgacata tgtttcaccg ctcctagatg tgctggataa
501 ctctatatca gcaccagcct cggttgcatc cgatccagac attacatttg
551 acgctacctc cagtgttcaa accaatgata tgctcccacg atcattcggc
601 gcgtattatg catacctatt gggtggggct gcgtctggaa aaaggtggca
651 ctcttatgtg ctacctatca caatgggaca ccataggagt gaaattggca
701 cttccaagac tggctattta catgaagatc ttgatgagtc agtcaggata
751 aggtactcgc tgcgcaatcc actacatatt ttgtgcgcgg cgggagctta
801 ttacgccaca gacctccttt tcactctggt aattgacggc gatttttcct
851 cagaaagagc cttcgcccaa cttggactca tccaaactcc attaatggag
901 tattatgatg ggtatactac tgatagaacc ctctcatctg aggggggata
951 ttctaatcag ttgggtgtag gtaaatctta tattcaattg cttgtcccaa
1001 ggaggaatta cagggctagg tccattacta cggacactgc tgctcttttc
1051 tttgaaacga taggatccct ttcagttcgc tttacagcga gcgacaagat
1101 taagggggtc cacttatttg tggaagcagc aggccctata gatatagatg
1151 ggtacgggag aggattagac attggacata ctgataagtc ctttgtcttg
1201 atgccctctc tccgtacggc tgcttgaaag cagtcctagg taatgcccgc
1251 tggaccttga cgcgggatgc tttcctcggg tggcacaaag gaaaatttct
1301 aggattttct tttctgtccc atatccaggt gatgcccacc ggacctgtaa
1351 cgtgggttaa tatgtaaata ctattgtgtg ttttctattt gtgttttgtt
1401 tgtttttctt taaaataaac tggatttcaa aaagggtttc ttgagttctt
1451 ccctttccga tccaggaact ccgcgtgttt ttcttgattt ctg