Sequence of DPV Satsuma dwarf virus

Citrus mosaic sadwavirus CP gene for coat protein, partial cds, segment RNA2-2.

ACC No: AB247639

Dated: 2007-04-21 | Length: 1403 | CRC: 709992018

                
ID   AB247639; SV 1; linear; genomic RNA; STD; VRL; 1403 BP.
XX
AC   AB247639;
XX
DT   21-APR-2007 (Rel. 91, Created)
DT   21-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Citrus mosaic sadwavirus CP gene for coat protein, partial cds, segment
DE   RNA2-2.
XX
KW   .
XX
OS   Citrus mosaic sadwavirus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sadwavirus.
XX
RN   [1]
RP   1-1403
RA   Ito T.;
RT   ;
RL   Submitted (24-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL   Takao Ito, National Institute of Fruit Tree Science, Department of Citrus
RL   Research; Otsu 954, Kuchinotsu, Nagasaki 859-2501, Japan
RL   (E-mail:itotaka@affrc.go.jp, Tel:81-957-86-2306, Fax:81-957-86-4268)
XX
RN   [2]
RA   Ito T., Ito T., Shiotani H., Iwanami T., Ozaki K., Muramoto K.;
RT   "Genetic diversity and a heterogeneous population of Citrus mosaic virus
RT   within a single citrus tree";
RL   J. Gen. Plant Pathol. 73:147-151(2007).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1403
FT                   /organism="Citrus mosaic sadwavirus"
FT                   /segment="RNA2-2"
FT                   /isolate="97032"
FT                   /mol_type="genomic RNA"
FT                   /note="synonym: Citrus mosaic virus"
FT                   /db_xref="taxon:57325"
FT   CDS             <1. .1227
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="BAF56882.1"
FT                   /translation="GKAAYLGLTASLFSMYNFWKGSYILKVDVLSKGSCAGAISIYVPP
FT                   PGTSADHYSQSQLDTLPRYELPWRGTGSARFEIENFSWIGWHLTKPQRYVTNEDWFSLN
FT                   AGVVVVLNQPPTTRTGGSSDIRVIFRIVKFKNLTLKERSTACDIFAGIKDVTYVSPLLD
FT                   VLDNPISAPASVASDPDVGFDATSSVQTNNMLPRSFGAYYAYLLGGASSGKRWHSYVLP
FT                   ITMGHHRSEIGTSKTGYLHETLDETVRIRYSLRNPLHILCAAGAYYATDLLFTLVIDGD
FT                   LIAERAFAQLGLIQTPLMEYYDGYTTDRALSSEGGHSNQLGIGKSYIQLLVPRRNYRAR
FT                   SVTTDTATLFFETIGSLSIRFTVSDKIKGVHLFVEAAGPIDIDGYGRGLDIGHTDQSFV
FT                   LMPSLRTAA"
XX
SQ   Sequence 1403 BP; 359 A; 302 C; 318 G; 424 T; 0 other;

ab247639 Length: 1403  21-APR-2007  Type: N  Check: 9571  ..

       1  gggaaagctg cttatttagg tttgacagct tccctttttt ccatgtacaa
      51  tttctggaag ggaagctata ttttaaaagt ggacgttctc tcgaaaggga
     101  gctgtgctgg agctattagt atctatgtgc cccctccagg tacgagtgct
     151  gatcattact cccaatcaca actggatact ctcccacgtt atgaacttcc
     201  gtggagagga acaggatccg ccaggttcga gatcgaaaac ttttcctgga
     251  ttgggtggca tttaaccaaa ccccagcgat atgtaactaa tgaagattgg
     301  ttttccctga atgctggggt ggttgtggtg cttaaccaac caccaacgac
     351  aagaactggt ggatcgagcg atataagggt gatttttcgt attgttaaat
     401  ttaaaaatct caccctcaag gaacgatcca cagcctgcga catattcgca
     451  ggtattaaag atgtaacata tgtttcaccg cttttagatg tgctagacaa
     501  tcctatctca gcaccagctt cagttgcatc tgacccggat gttggatttg
     551  acgctacctc cagcgttcaa accaacaata tgcttccgcg atcatttggc
     601  gcgtattacg cctacttatt aggtggagca tcatccggga aaaggtggca
     651  ctcttatgtg ctgcctatta ctatgggaca tcacagaagt gagattggta
     701  cttccaagac cggttaccta catgaaacac ttgatgaaac ggtcaggatt
     751  aggtactcgt tgcgcaaccc attacacatt ttatgcgcgg cgggggctta
     801  ttatgccact gatctccttt ttactctggt aattgatggc gatctcatcg
     851  ctgaaagagc ctttgctcag ctaggactca tccagactcc tttaatggag
     901  tattatgatg ggtataccac cgatagagct ctctcatctg agggaggaca
     951  ttctaaccag ctgggtatag gcaaatcata tatccaatta cttgtcccaa
    1001  ggaggaatta tagggcaagg tccgttacta cggacactgc taccctcttc
    1051  tttgaaacga ttggatctct ttcaatccga ttcacagtca gtgataagat
    1101  taagggggtc cacttatttg tggaagcagc aggccctata gatatagatg
    1151  gatacggaag ggggcttgat attggacata ctgatcagtc ctttgttttg
    1201  atgccctcac ttcgtacagc tgcttgaagg cggcattagg tgatgcccac
    1251  cggaccttaa cgtgggataa tatgtaaata cttgtgtgta ttttctattt
    1301  aagtattttg tttgttttct taaaataaac tggatttcaa aaagggtttc
    1351  ttgagttctt ccctttccga tccaggaact tcgcgtgttt ttcttgattt
    1401  ctg