Sequence of DPV Chinese yam necrotic mosaic virus

Chinese yam necrotic mosaic virus gene for coat protein, complete cds.

ACC No: AB255747

Dated: 2007-04-21 | Length: 1098 | CRC: 1370150322

                
ID   AB255747; SV 1; linear; genomic RNA; STD; VRL; 1098 BP.
XX
AC   AB255747;
XX
DT   21-APR-2007 (Rel. 91, Created)
DT   21-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Chinese yam necrotic mosaic virus gene for coat protein, complete cds.
XX
KW   .
XX
OS   Chinese yam necrotic mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae.
XX
RN   [1]
RP   1-1098
RA   Kondo T.;
RT   ;
RL   Submitted (05-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Toru Kondo, Aomori Green BioCenter, Plant Disease Bio-control Division;
RL   Nogi, Yamaguchi, 221-10, Aomori-shi, Aomori 030-0142, Japan
RL   (E-mail:tooru_kondo@pref.aomori.lg.jp, Tel:81-17-728-1015,
RL   Fax:81-17-728-1017)
XX
RN   [2]
RA   Kondo T., Kasai K., Yamashita K., Ishitani M.;
RT   "Selection and discrimination of an attenuated strain of Chinese yam
RT   necrotic mosaic virus for cross-protection";
RL   J. Gen. Plant Pathol. 73:152-155(2007).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1098
FT                   /organism="Chinese yam necrotic mosaic virus"
FT                   /strain="KM3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:128818"
FT   CDS             1. .867
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /protein_id="BAF56884.1"
FT                   /translation="MDLSTPVQLPTKKPSVEDKGKALAIPSTTATLPDSSQGHQPVEEP
FT                   NNNPDTVDEEDIEWRIPAIQKGFGHYKIPKVKGKRIWNPKILKKIAHEQFTTTSQMVTT
FT                   DKLEKWTEEVKRDLVVTNETDFQICLTSWCLWCANNGTSSELDASQFMEVHANGQIMGI
FT                   PIQIFVEPAIQHGGLRKVMRHFSGITSKMLSEGGKMTAWGRKRGFTQRSMIPYAFDFFV
FT                   PTDTTPKTIREQLSQSKAAAIGRGVQRVMLLDGKVHGSRTSYERHTDNDQDEYEHGGAE
FT                   DQRPALY"
XX
SQ   Sequence 1098 BP; 356 A; 217 C; 260 G; 265 T; 0 other;

ab255747 Length: 1098  21-APR-2007  Type: N  Check: 517  ..

       1  atggacctga gcactccagt gcaattgcca acaaagaaac catctgtgga
      51  agacaaagga aaagctcttg ccataccttc aacaacagct acattgccag
     101  attcaagcca agggcaccaa ccagttgaag aaccaaacaa taacccagac
     151  acagtggatg aagaggacat tgaatggcga atcccagcaa tacagaaagg
     201  ttttggccac tacaaaattc caaaggtcaa aggaaagaga atatggaacc
     251  cgaagatttt gaagaaaatc gcacatgagc aattcacgac gacatcgcag
     301  atggtgacaa cagataaatt ggagaaatgg actgaggagg tcaaaagaga
     351  tcttgtggta acaaatgaaa cagatttcca gatatgctta acatcgtggt
     401  gtctctggtg tgctaacaat ggtacatcat ctgagttaga tgcatcacaa
     451  tttatggaag tccatgcaaa cggacagata atggggattc caattcaaat
     501  ttttgttgaa cccgcaattc agcacggagg actacgtaaa gtgatgagac
     551  atttcagtgg aataacgagc aaaatgttgt ctgaaggggg aaagatgaca
     601  gcgtggggca ggaaaagggg tttcacccaa agatcaatga taccatatgc
     651  ctttgatttc ttcgtcccaa ctgatacgac gccaaaaaca atcagggagc
     701  agctgagtca aagcaaggcc gcagctattg ggcgtggtgt tcaaagggtg
     751  atgcttcttg atgggaaagt tcacgggagc cgcacaagtt acgagagaca
     801  cacggataac gaccaggacg agtatgaaca tggaggggcg gaagatcagc
     851  gcccagcttt atattagtaa ggtttgtttt gcaacaacca ttactactag
     901  tattagaaga attaagttta atttctttca cgatcttcac ttttaacttt
     951  tgcgtttatg agttaaatgg gagtttttgt gggtttttct tccaatgctc
    1001  agcaaccctc aacgcactgc atttcgtctt cttctttaag cttgagctgg
    1051  atgctcagct ggtttcgcat agcgaaactt atcctgttcc atagaagg