Sequence of DPV Ornithogalum virus 3
Ornithogalum virus 3 gene for polyprotein, partial cds.
ACC No: AB282754
Dated: 2008-04-01 | Length: 1147 | CRC: 1487581992
ID AB282754; SV 1; linear; genomic RNA; STD; VRL; 1147 BP.
XX
AC AB282754;
XX
DT 15-MAY-2007 (Rel. 91, Created)
DT 01-APR-2008 (Rel. 95, Last updated, Version 2)
XX
DE Ornithogalum virus 3 gene for polyprotein, partial cds.
XX
KW .
XX
OS Ornithogalum virus 3
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1147
RA Fuji S., Matsumoto T., Yamamoto H., Inoue M.;
RT ;
RL Submitted (14-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL Contact:Shin-ichi Fuji Akita Prefectural University, Facaluty of
RL Bioresource Sciences; Shimoshinjo Nakano, Akita, Akita 010-0195, Japan
XX
RN [2]
RA Matsumoto T., Yamamoto H., Fuji S., Inoue M.;
RT "Characterization of a novel potyvirus tentatively named Ornithogalum virus
RT 3, successfully isolated from O. thyrsoides co-infected with two other
RT potyviruses by single-aphid inoculation";
RL J. Gen. Plant Pathol. 74:76-80(2008).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1147
FT /organism="Ornithogalum virus 3"
FT /mol_type="genomic RNA"
FT /country="Japan"
FT /isolation_source="Ornithogalum thyrsoides"
FT /db_xref="taxon:186643"
FT CDS <1. .1038
FT /codon_start=1
FT /transl_table=1
FT /product="polyprotein"
FT /note="3'-terminal region"
FT /note="nuclear inclusion b - coat protein region, NIb/CP"
FT /db_xref="GOA:A5A7P6"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:A5A7P6"
FT /protein_id="BAF62181.1"
FT /translation="AWGYDDLLKEIREFYAWLIGMEPFKHIASEGGAPYVAETALRYLY
FT LEADADANELERYIRSYEQRLSEIKAEEMVMFQSGTEDAGSEEEKRKRAEEKAKREANQ
FT TSSSKHGEDVNASTKGTYIIPRLRRMTKMRTPKFGGKELLNLDHLLSYKPDELELSNTR
FT ATQAQFNRWCAKVMEAYQVKEDEFRIIANGLMVWCIESGTSPNINGNWIMMDGQEQVEY
FT PLKPVVEFAKPTLRQIMAHFSDAAEAYIEMRNAEEPYMPRYGLIRNLTDMSLARYAFDF
FT YEVHARTPVRAREAHMQMKAAALRGSTSRLFGLDGNVGDANEDTERHTADDVNRNMHNL
FT MGLKL"
XX
SQ Sequence 1147 BP; 332 A; 237 C; 332 G; 246 T; 0 other;
ab282754 Length: 1147 01-APR-2008 Type: N Check: 875 ..
1 gcatggggtt atgatgattt gctaaaggag atccgcgagt tctatgcttg
51 gctgatcgga atggaaccat tcaaacacat tgcctcagag ggcggagcgc
101 catatgttgc ggagacagct ttacggtacc tttacttgga agcggatgct
151 gacgccaatg aattagagag gtacatacgg agctatgaac agaggttgag
201 cgagattaaa gctgaggaaa tggtgatgtt ccagtctggc acggaagatg
251 cgggcagtga agaggaaaaa cgcaagcgcg ccgaggagaa agccaagcga
301 gaggcgaacc agacctcaag ctcaaagcat ggagaagatg tcaacgcctc
351 cacaaaggga acatacatca taccgaggct acgacgtatg acgaaaatgc
401 ggacgcctaa gtttggaggc aaggaactgt tgaatttgga tcacttgttg
451 tcatacaagc cagatgaact tgaactatca aatactcggg caactcaagc
501 acaattcaac cgttggtgtg cgaaggttat ggaggcatac caggtgaagg
551 aggatgagtt caggatcata gcgaatggcc tgatggtctg gtgcattgag
601 agcgggacat caccaaacat taatggcaac tggatcatga tggacggcca
651 ggaacaagtt gagtaccctt tgaagccggt ggtcgaattc gccaagccaa
701 cgcttaggca gattatggca catttcagtg acgcagcgga ggcgtatatt
751 gagatgcgta acgctgaaga accctatatg ccgcgctatg ggttgattcg
801 taacctgacg gacatgagct tagcacggta tgcatttgat ttttacgaag
851 tgcacgcccg cactccagtg agagcacgtg aagcgcatat gcagatgaag
901 gccgcggcac tccgcggcag cacatcacgt ctgtttgggc tagatggaaa
951 cgtgggcgac gcgaacgaag acacagagcg gcacacagcg gatgatgtca
1001 accgcaacat gcataatttg atgggtttga agttgtagga cgttaagtat
1051 tactccttaa ttagttaacg ctgtaaacgt ccaaggtttt cggagttcta
1101 gaaccaaatc agtgtggtgt accaccttgt gtctagaatg atgagac