Sequence of DPV Potato virus Y

Potato virus Y CP gene for coat protein, partial cds, isolate: SYR-D9.

ACC No: AB295478

Dated: 2009-03-12 | Length: 801 | CRC: 122252372

                
ID   AB295478; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
XX
AC   AB295478;
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DT   10-SEP-2007 (Rel. 93, Created)
DT   12-MAR-2009 (Rel. 100, Last updated, Version 3)
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DE   Potato virus Y CP gene for coat protein, partial cds, isolate: SYR-D9.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-801
RA   Chikh Ali M.S.;
RT   ;
RL   Submitted (02-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Mohamad S Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University; Mine-machi 350, Utsunomiya 321-8505,
RL   Japan
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RN   [2]
RA   Chikh Ali M.S., Maoka T., Natsuaki K.T.;
RT   "A point mutation changes the serotype of a Potato virus Y isolate and
RT   genomic determination of the serotype of PVY strains";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /lab_host="Nicotiana tabacum cv. Samsun"
FT                   /strain="PVYN/NTN"
FT                   /isolate="SYR-D9"
FT                   /serotype="N"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Aleppo"
FT                   /isolation_source="potato"
FT                   /collected_by="KATAYAMA Katsumi"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A7VKJ2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A7VKJ2"
FT                   /protein_id="BAF76761.1"
FT                   /translation="GNDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 801 BP; 276 A; 163 C; 190 G; 172 T; 0 other;

ab295478 Length: 801  12-MAR-2009  Type: N  Check: 1887  ..

       1  ggaaatgaca caatcgatgc aggaggaagc actaagaagg atgcaaaaca
      51  agagcaaggt agcattcaac caaatctcaa caaggaaaag gaaaaggacg
     101  tgaatgttgg aacatctgga actcatactg tgccacgaat taaagctatc
     151  acgtccaaaa tgagaatgcc caagagtaaa ggtgcaactg tgctaaattt
     201  ggaacactta ctcgagtatg ctccacagca aattgacatc tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaagcggt acaacttgca
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa catcaacgga gtttgggtta
     401  tgatggatgg agatgaacaa gtcgaatacc cactgaaacc aatcgttgag
     451  aatgcaaaac caacacttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttagt tcgtaatctg cgcgatggaa gtttggctcg ctatgctttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  g