Sequence of DPV Torque teno midi virus 7
Torque teno midi virus DNA, complete genome, isolate: MDJHem3-2.
ACC No: AB303554
Dated: 2008-12-16 | Length: 3197 | CRC: 1061930679
ID AB303554; SV 1; circular; genomic DNA; STD; VRL; 3197 BP.
XX
AC AB303554;
XX
DT 30-AUG-2007 (Rel. 93, Created)
DT 16-DEC-2008 (Rel. 98, Last updated, Version 4)
XX
DE Torque teno midi virus DNA, complete genome, isolate: MDJHem3-2.
XX
KW .
XX
OS Torque teno midi virus
OC Viruses; ssDNA viruses; Anelloviridae; unclassified Anelloviridae.
XX
RN [1]
RP 1-3197
RA Okamoto H.;
RT ;
RL Submitted (11-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Okamoto Jichi Medical University School of Medicine,
RL Division of Virology, Department of Infection and Immunity; 3311-1
RL Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan
XX
RN [2]
RX DOI; 10.1007/s00705-007-1046-6.
RX PUBMED; 17712598.
RA Ninomiya M., Takahashi M., Shimosegawa T., Okamoto H.;
RT "Analysis of the entire genomes of fifteen torque teno midi virus variants
RT classifiable into a third group of genus Anellovirus";
RL Arch. Virol. 152(11):1961-1975(2007).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3197
FT /organism="Torque teno midi virus"
FT /host="Homo sapiens"
FT /isolate="MDJHem3-2"
FT /mol_type="genomic DNA"
FT /country="Japan"
FT /isolation_source="human serum"
FT /db_xref="taxon:432261"
FT CDS join(220. .596,2173. .2584)
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF4"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:A7VLW1"
FT /protein_id="BAF76082.1"
FT /translation="MQNISADNFFRPTHFNQVTKQQIWMQQIQDSHDNICNCNSCFAHL
FT LANIFPPGHKDRDLSINQILARDLNQPCHSGGTEEERTGGDTNTRPENTGAADGPAEEG
FT KHYIEDADLQELIAAGEDATGRNNTKKEAKTSSNSSQPRGRNTRSPKMSPLALRRKYLP
FT RRGGNKPPAAHQAAKVSTAKAQIQHGQAPHRPQGKTENFTTTNRTPRLTPFKAGFEIET
FT EREVAWAFSRPPRLFKEDPPFYPWLPKLTPLVNFHLNYKF"
FT CDS join(220. .596,1944. .2376)
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF3"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:A7VLW2"
FT /protein_id="BAF76083.1"
FT /translation="MQNISADNFFRPTHFNQVTKQQIWMQQIQDSHDNICNCNSCFAHL
FT LANIFPPGHKDRDLSINQILARDLNQPCHSGGTEEERTGGDTNTRPENTGAADGPAEEG
FT KHYIEDADLQELIAAGEDATGSGAVPTQMNQKLQIQKCYPPMMCPIQSKKQYKLLTQKS
FT SHPKPLYTPGTTAGDLLKKKLLKECAQTSQLIQNFNQLQKQHQKRSQDFEQLFPTPRKK
FT HKKSKNVSSRSAKKVPTKKRRKQTSSSSSSSKSINSKSSNTTWSSSS"
FT CDS 220. .600
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:A7VLW3"
FT /protein_id="BAF76084.1"
FT /translation="MQNISADNFFRPTHFNQVTKQQIWMQQIQDSHDNICNCNSCFAHL
FT LANIFPPGHKDRDLSINQILARDLNQPCHSGGTEEERTGGDTNTRPENTGAADGPAEEG
FT KHYIEDADLQELIAAGEDATGR"
FT CDS 435. .2429
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:A7VLW4"
FT /protein_id="BAF76085.1"
FT /translation="MPFWWNRRRKNWWGYKYKTRKYRRRRWPRRRRQTLYRRRRPTRTN
FT RRRRRRHRKVKRKRKTLTVKQWQPESIRKCKIIGLEPQLLGAEGSQIDCFTVVKTDYVP
FT AKLPWGGGFSLQNYTLKYLYSEYTYHNNIWTSSNNQKDLCRYTGGYIKLFRHETQDFII
FT SYDLQPPHELSKYTFPSCHPHQMLLQKRHKILLSKQSNPNGKLYKKIKFKPPKQMINKW
FT LFTKNFTPASLIVLKTAVCNFSHANLSGKNQNMLVSLISLNLSFYKNPAWAQALTASGY
FT KPYDNIPSDLPFVVKQANKEVQKYMKPQATTDYSTSISYDDGWFGPLFLSAIKIGKIEQ
FT ATATHQIIQARYNPNIDSGVGNQIYCASTHAYSWAPPSKDKQLLIEGMPLWLGLFGYYS
FT FVRSVKSEDFMKAHVICIKSPALYCYPEIGSCDTYVFIDPEFISGKRPYEQLITSQQKR
FT LWYPDMSWQKKTMNTLVEAGPYVPKLSDETFSNWELNSRYCFYFKWGGPYTDEPEIANP
FT EMLPTYDVPDTVQKTIQIVNPEKQSPETIIHPWDYRRGLIKEKALKRMCSNISTDTEFQ
FT PVAETTPKKKPRLRATLPNPEEETQEVQKCLLSLCEESTYQEEEETNLQQLIKQQKYQQ
FT QKLKYNMVKLLIDLKEKQRILQQQTGLLD"
XX
SQ Sequence 3197 BP; 1120 A; 752 C; 602 G; 723 T; 0 other;
ab303554 Length: 3197 16-DEC-2008 Type: N Check: 2374 ..
1 gggtggagac tttaaatata tataagcaag tgcagtgacg aatggctgag
51 tttaccccgc tagacggtgc agggaccgga gcgagcgcag cgaggaggtc
101 cccggctgcc caagggcggg agcccgaggt gagtgaaacc agcgaggtct
151 aggggcaatt cgggctaggg cagtctagcg gaacgggcaa gaaacttaaa
201 actatgcttt gttttacaga tgcaaaatat atctgctgat aactttttta
251 gacctactca ttttaatcaa gtaacaaaac aacagatatg gatgcagcaa
301 atacaagact cccatgacaa tatctgcaac tgcaacagtt gttttgctca
351 cctgcttgct aatatttttc ctcctggcca taaagatagg gatctctcaa
401 ttaatcaaat acttgcaaga gacctcaacc agccatgcca ttctggtgga
451 acagaagaag aaagaactgg tggggataca aatacaagac cagaaaatac
501 aggcgccgca gatggccccg cagaagaagg caaacactat atagaagacg
551 cagacctaca agaactaatc gccgcaggag aagacgccac aggaaggtaa
601 aaagaaaaag aaaaacttta actgttaaac aatggcaacc agaaagtatt
651 agaaagtgta aaataattgg cttagaacca cagcttctag gggcagaggg
701 ttcacaaatt gactgcttta ctgtagttaa aacagactat gtaccagcta
751 agttaccatg gggagggggc tttagcctgc aaaactatac tcttaaatac
801 ttatactctg aatatacata ccataacaac atatggacat ctagtaacaa
851 tcaaaaagac ctatgcagat atacaggagg atacatcaaa ctttttagac
901 atgaaacaca agactttatt ataagctatg acttacaacc accacatgaa
951 ctatcaaaat atacatttcc atcttgtcac ccacatcaaa tgcttttaca
1001 aaaaagacat aaaattttac ttagtaaaca atctaaccca aatggcaaac
1051 tttataagaa aatcaaattt aaacctccaa aacaaatgat aaataaatgg
1101 ttatttacta agaattttac acctgcatct ttaatagtgc taaagacagc
1151 agtatgcaac ttttcacatg ccaatttaag tggcaaaaat caaaatatgc
1201 ttgtgagctt aatttcttta aatttaagct tttataaaaa tccagcctgg
1251 gctcaagcct taacagcatc aggctacaaa ccatatgaca atataccaag
1301 cgacttacct tttgtagtta aacaagcaaa caaagaggta caaaaatata
1351 tgaaaccaca agcaacaact gactattcaa caagcatatc atatgacgat
1401 ggatggtttg gcccactatt tttatcagct attaaaatag gtaaaataga
1451 acaagccaca gcaacacacc aaataattca agcaagatat aaccctaata
1501 tagactctgg tgttggtaat caaatttact gtgcatcaac acatgcatat
1551 tcatgggcac caccctcaaa agataagcaa ctacttatag aaggaatgcc
1601 tttatggcta ggactttttg gttattattc atttgttaga agtgtaaaaa
1651 gtgaagactt tatgaaagct catgttattt gcataaagtc tccagcacta
1701 tattgttatc cagaaatagg gtcctgtgat acatatgttt ttattgaccc
1751 tgaatttata tcaggaaaga gaccatatga acaactaatc acttcacaac
1801 aaaaaagact ctggtaccca gatatgagct ggcaaaaaaa gaccatgaac
1851 actttagttg aagcaggtcc ttatgtacct aaattatcag atgaaacatt
1901 cagtaactgg gaactaaaca gtcgctattg tttttatttt aagtggggcg
1951 gtccctacac agatgaacca gaaattgcaa atccagaaat gctacccacc
2001 tatgatgtgc ccgatacagt ccaaaaaaca atacaaattg ttaacccaga
2051 aaagcagtca cccgaaacca ttatacaccc ctgggactac cgcaggggac
2101 ttattaaaga aaaagctctt aaaagaatgt gctcaaacat ctcaactgat
2151 acagaatttc aaccagttgc agaaacaaca ccaaaaaaga agccaagact
2201 tcgagcaact cttcccaacc ccgaggaaga aacacaagaa gtccaaaaat
2251 gtctcctctc gctctgcgaa gaaagtacct accaagaaga ggaggaaaca
2301 aacctccagc agctcatcaa gcagcaaaag tatcaacagc aaaagctcaa
2351 atacaacatg gtcaagctcc tcatagacct caaggaaaaa cagagaattt
2401 tacaacaaca aacaggactc ctagactaac accatttaaa gctggctttg
2451 aaatagaaac agaaagagaa gtagcctggg ctttttccag accacctaga
2501 ctatttaaag aagaccctcc cttttaccct tggttaccaa aactaacacc
2551 ccttgtaaac tttcacctta actacaaatt ctaggcctac aatgttcact
2601 tagtggtgtc tgtttaataa agtttgctcc ccaaaaaaaa aaaaaaaaaa
2651 taaaaaattg caaaaattcg gcgctcgcgc gcgctgcgcg cgcgcgagcg
2701 ccgtcacgcg ccggcgctcg cgcgccgcgc gtatgtgcta acacaccacg
2751 cacctagatt ggggtgcgcg cgtagcgcgc gcaccccaat gcgccccgcc
2801 ctcgttccga cccgcttgcg cgggtcggac cacttcgggc tcgggggggc
2851 gcgcctgtgg cgcttattta ctaaacagac tccgagtcgc catttggccc
2901 ccctaagctc cgcccccctt atgaatattc ataaaggaaa ccacaaaatt
2951 agaattgcca accacaaact gccatatgct aattagttcc cctttttcac
3001 agtaaaaagg ggaagtgggg gggcaaagcc cccccacacc ccccgcgggg
3051 ggggcaaagc cccccccgca ccccccctac gtcacaaacc acgcccccgc
3101 cgccatcttg ggtgcggcag ggcgggggct aaaatggcgg gacccaatca
3151 tttcatactt tcactttcca attaaaaccc gccacgtaaa cacaaag