Sequence of DPV Torque teno midi virus 14
Torque teno midi virus DNA, complete genome, isolate: MDJN97.
ACC No: AB303566
Dated: 2008-12-16 | Length: 3223 | CRC: 1219914437
ID AB303566; SV 1; circular; genomic DNA; STD; VRL; 3223 BP.
XX
AC AB303566;
XX
DT 30-AUG-2007 (Rel. 93, Created)
DT 16-DEC-2008 (Rel. 98, Last updated, Version 4)
XX
DE Torque teno midi virus DNA, complete genome, isolate: MDJN97.
XX
KW .
XX
OS Torque teno midi virus
OC Viruses; ssDNA viruses; Anelloviridae; unclassified Anelloviridae.
XX
RN [1]
RP 1-3223
RA Okamoto H.;
RT ;
RL Submitted (11-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Okamoto Jichi Medical University School of Medicine,
RL Division of Virology, Department of Infection and Immunity; 3311-1
RL Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan
XX
RN [2]
RX DOI; 10.1007/s00705-007-1046-6.
RX PUBMED; 17712598.
RA Ninomiya M., Takahashi M., Shimosegawa T., Okamoto H.;
RT "Analysis of the entire genomes of fifteen torque teno midi virus variants
RT classifiable into a third group of genus Anellovirus";
RL Arch. Virol. 152(11):1961-1975(2007).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3223
FT /organism="Torque teno midi virus"
FT /host="Homo sapiens"
FT /isolate="MDJN97"
FT /mol_type="genomic DNA"
FT /country="Japan"
FT /isolation_source="human serum"
FT /db_xref="taxon:432261"
FT CDS join(217. .590,2176. .2596)
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF4"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:A7VM09"
FT /protein_id="BAF76130.1"
FT /translation="MQNISNKDFYTPTPYNEETKTQIWMSQIADSHDNICNCTFPFAHL
FT LASIFPPGHQDRNLSINQILARDYTAKCLSGGDAAESHGMADSGTGGGFKPKEEETEED
FT LPGEEIDELLAAAAAEQDTKRRESKKEKAKTWSSPQRSPRSTERNPSLSPLTLRRKYMP
FT RNTRQDTRAAHPPAAATAAAPQIQHHQTSPRPKGTTENATTTNRDIRVTLTRFKPGFER
FT DTENEVALAFSRPPRLFKEDNPFYPWLPKPEPLVNFHLNYKF"
FT CDS join(217. .590,1947. .2382)
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF3"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:A7VM10"
FT /protein_id="BAF76131.1"
FT /translation="MQNISNKDFYTPTPYNEETKTQIWMSQIADSHDNICNCTFPFAHL
FT LASIFPPGHQDRNLSINQILARDYTAKCLSGGDAAESHGMADSGTGGGFKPKEEETEED
FT LPGEEIDELLAAAAAEQDTKSGVDHKFQDKTLKIHKTLTPMMYPINSQAEHKLPTQQNK
FT LLKQFYNLGTTEGDNLKKQLLKECSNTSKLIQSLNILQKRVQKRKSKDLEQPSEIPKKH
FT RKKPKLVSSHSAKKIHAKKHKTRHSSSSSTSSSNSSSTSNSTSSNFS"
FT CDS 217. .594
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:A7VM11"
FT /protein_id="BAF76132.1"
FT /translation="MQNISNKDFYTPTPYNEETKTQIWMSQIADSHDNICNCTFPFAHL
FT LASIFPPGHQDRNLSINQILARDYTAKCLSGGDAAESHGMADSGTGGGFKPKEEETEED
FT LPGEEIDELLAAAAAEQDTKR"
FT CDS 432. .2435
FT /codon_start=1
FT /transl_table=1
FT /product="hypothetical protein"
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:A7VM12"
FT /protein_id="BAF76133.1"
FT /translation="MPFWWRRRRKPWYGRFRYRRRFQTKRRRNRRRFTRRRNRRVTRRR
FT RRRTRHQKVRRKKNKIPVLQWQPDSIRKCHIKGQGTLVVGAEGTQMFCYTRDKFKYIPP
FT KTPYGGGFGAEKFTLSYLYEEYTFHNNVWTATNLYKDLCRYLYCKIIFFRHPDTDFVIN
FT YSRQPPWELSKYTYPSCHPHQMLLDKHKVVIFSQASKPHGKYKYKLRIKPPKQLITKWF
FT FTKPFSNYGLLFLKGSAMNLRYSYLSASNENMLVNISSLNPQWYVNTDWARARQDTQGY
FT LPQPNMNKSLSYKNKTKGGSETTTQMPSTSFTSYSASVSYDNGWFNKNFLRAIELQSPT
FT GTKLGQLPLNYGRYNPTRDKGIGNKIYIISTIADSWGPPTTDKNVLIENLPLWLGLYGY
FT ISYLETIKPPDWLKSSLIVLVSDAIYHSGTPVPSTKWAPIDSDYIDGNKPYDQYITPTE
FT KTRWYPNYKWQLKTLNAIVECGPYIQQYAEEKNSTWELKYHYNFYFKWGGPQVPGQDIK
FT NPQDLNTYDVPDKLTGRTQITNPAKQAPETILQPWDYRRGQLKETALKRMLQHLETDSE
FT FEYFTEESPKKKKQRLGAALRDPQEAQKETQACLLSLCEENTCQETQDKTLEQLIHQQQ
FT QQQQHLKFNIIKLLLDLKEQQRMLQLQTGILE"
XX
SQ Sequence 3223 BP; 1140 A; 778 C; 598 G; 707 T; 0 other;
ab303566 Length: 3223 16-DEC-2008 Type: N Check: 2331 ..
1 gggaggagac tattaaacta tataactaac tacagtgacg aatggctgag
51 tttaccccgc tagacggtgc agggaccgga tcgagcgcag cgaggaggtc
101 cacagctgcc catgggcggg agcccgaggt gagtgaaacc accgaggtct
151 aggggcaatt cgggctaggg cagtctagcg gaacgggcaa gaaacttaaa
201 atatttttta ttacagatgc agaacatctc aaacaaagac ttttatactc
251 ccacacccta caacgaagag acaaaaactc aaatatggat gtctcaaatt
301 gctgattctc acgataatat ctgtaattgt acttttccat tcgctcatct
351 gcttgcttcc atatttcctc ctggtcacca agacaggaac ctttctatta
401 accaaatact cgcaagggat tacacagcta aatgcctttc tggtggagac
451 gccgcagaaa gccatggtat ggcagattca ggtacaggag gaggtttcaa
501 accaaaagaa gaagaaacag aagaagattt accaggagaa gaaatagacg
551 agttactcgc cgccgccgcc gcagaacaag acaccaaaag gtaagaagaa
601 aaaaaaataa aattcctgta ctgcagtggc agcctgacag cattagaaaa
651 tgccacataa aaggacaagg gactctagtt gttggagctg aaggaacaca
701 aatgttttgc tatacaagag ataaatttaa atacatacct cctaaaaccc
751 cttatggagg aggatttgga gcagaaaaat ttaccttaag ctacctatat
801 gaagagtaca cttttcataa caatgtatgg actgccacta atttatacaa
851 agacttgtgc agatacttgt actgcaaaat cattttcttt aggcatccag
901 acacagactt tgtaattaac tacagcagac aaccaccatg ggaactaagt
951 aaatacacat acccaagctg tcacccacac caaatgttat tagacaaaca
1001 caaggtagtt atatttagtc aagcaagcaa acctcatggc aaatataaat
1051 acaaactaag aattaaacca ccaaaacaac tcattactaa gtggttcttc
1101 acaaaaccat tttctaacta tggcttactt tttctaaaag gctctgctat
1151 gaatttaaga tacagttact taagtgcatc caatgaaaac atgttagtaa
1201 acatatcttc tttaaaccct caatggtatg taaacacaga ctgggccaga
1251 gctagacaag atacacaagg ttacctgcca caacctaata tgaacaaaag
1301 cttatcatac aaaaacaaaa caaaaggtgg aagtgaaaca accacacaaa
1351 tgccaagtac ttcatttaca tcatatagtg ccagtgtaag ttatgacaat
1401 ggatggttta acaaaaactt ccttagagct atagaactac aatcacctac
1451 aggtacaaag ctaggacagt tacctttaaa ctatgggagg tacaacccca
1501 ctagagataa aggcattgga aacaaaattt acattattag tacaatagca
1551 gacagctggg gaccacctac cacagacaaa aatgtactta tagaaaattt
1601 accactgtgg cttggcctat atggttatat ttcttactta gaaactatta
1651 aaccacctga ttggctaaaa tcatccctaa tagtattagt atctgatgcc
1701 atttaccact caggtacacc agtaccttca actaaatggg cacccattga
1751 ctcagactac atagatggca ataaaccata tgaccaatac ataacaccta
1801 cagaaaaaac aaggtggtac ccaaactaca aatggcaatt aaaaacctta
1851 aatgctatag ttgagtgtgg cccatacata caacagtatg ctgaagaaaa
1901 aaacagtacc tgggaactaa aatatcatta taatttttac tttaagtggg
1951 gtggaccaca agttccagga caagacatta aaaatccaca agaccttaac
2001 acctatgatg tacccgataa actcacaggc agaacacaaa ttaccaaccc
2051 agcaaaacaa gctcctgaaa caattttaca accttgggac tacagaaggg
2101 gacaacttaa agaaacagct cttaaaagaa tgctccaaca cctcgaaact
2151 gattcagagt ttgaatattt tacagaagag agtccaaaaa agaaaaagca
2201 aagacttgga gcagccctca gagatcccca agaagcacag aaagaaaccc
2251 aagcttgtct cctctcactc tgcgaagaaa atacatgcca agaaacacaa
2301 gacaagacac tcgagcagct catccaccag cagcagcaac agcagcagca
2351 cctcaaattc aacatcatca aacttctcct agacctaaag gaacaacaga
2401 gaatgctaca actacaaaca gggatattag agtaacttta acaaggttta
2451 aaccaggctt tgaaagagac actgaaaatg aagtagcact tgcattttct
2501 agacccccta gactgtttaa agaagacaat cccttttatc cttggctacc
2551 aaaacctgaa ccccttgtaa actttcactt aaattacaaa ttctaggcct
2601 acacttttca cttagtggtg tatgtttaat aaagtttgca ccccaaaaaa
2651 attgtaaaaa aaaaaaaaaa aaaaaataaa aaattgcaaa aattcggcgc
2701 tcgcgcgcgc tgcgcgcgcg cgagcgcctt cacgcgccgg cgctcgcgcg
2751 ccgcgcgtat gtgctaacac accacgcacc tagattgggg tgcgcgcgta
2801 gcgcgcgcac cccaatgcgc cccgccctcg ttccgacccg cttgcgcggg
2851 tcggaccact tcgggctcgg gggggcgcgc ctgcggcgct aatttactaa
2901 acagactccg agtcgccatt tggcccccct aagctccgcc cccctcatga
2951 atattcataa aggaaaccac aaaatttgaa ctgccgacca caaactgcca
3001 tatgctaatt agttcccctt ttacacagta aaaaggggaa gtgggggggc
3051 aaagcccccc cacacccccc gcgggggggg cagagccccc cccgcacccc
3101 ccctacgtca ctaaccacac ccccgccgcc atcttgggtg cggcagggcg
3151 gagactaaaa tggcggcatc caattatttt aaactttcac tttccaatta
3201 aaacatgcca catcacacac aat