Sequence of DPV Potato virus Y

Potato virus Y genes for polyprotein, Coat protein, partial cds, isolate: NTN68.

ACC No: AB331541

Dated: 2008-03-01 | Length: 801 | CRC: 1358532201

                
ID   AB331541; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
XX
AC   AB331541;
XX
DT   01-MAR-2008 (Rel. 95, Created)
DT   01-MAR-2008 (Rel. 95, Last updated, Version 1)
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DE   Potato virus Y genes for polyprotein, Coat protein, partial cds, isolate:
DE   NTN68.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-801
RA   Ohshima K.;
RT   ;
RL   Submitted (04-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Kazusato Ohshima Saga University, Faculty of Agriculture,
RL   Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502,
RL   Japan
XX
RN   [2]
RA   Ogawa T., Tomitaka Y., Nakagawa A., Ohshima K.;
RT   "Genetic structure of a population of Potato virus Y inducing potato tuber
RT   necrotic ringspot disease in Japan; comparison with North American and
RT   European populations";
RL   Virus Res. 131:199-212(2008).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /isolate="NTN68"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAG12049.1"
FT                   /translation="GNDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQIEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     1. .801
FT                   /gene="CP"
FT                   /product="Coat protein"
XX
SQ   Sequence 801 BP; 283 A; 156 C; 183 G; 179 T; 0 other;

ab331541 Length: 801  01-MAR-2008  Type: N  Check: 5273  ..

       1  ggaaatgaca caatcgatgc aggaggaagc actaagaaag atgcaaaaca
      51  agagcaaggt agcattcaac caaatctcaa caaggaaaag gaaaaggacg
     101  tgaatgttgg aacatctgga actcacactg tgccacgaat taaagctatc
     151  acgtccaaaa tgagaatgcc caagagtaag ggtgcaactg tactaaattt
     201  ggaacactta ctcgagtatg ctccacagca aattgacatc tcaaatactc
     251  gagcaactca atcacagttt gatacatggt atgaagcagt acaacttgca
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tatcaatgga gtttgggtta
     401  tgatggatgg agatgaacaa atcgaatacc cactgaaacc aatcgttgag
     451  aatgcaaaac caacacttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttagt tcgtaatctg cgcgatggaa gtttggctcg ctatgctttt
     601  gacttttatg aagttacatc acggacacca gtgagggcta gagaggcaca
     651  cattcaaatg aaggccgcag ctttaaaatc agctcaatct cgacttttcg
     701  gattggatgg tggcatcagt acacaagagg aaaacacaga gaggcacacc
     751  accgaggatg tttctccaag tatgcatact ctacttggag tgaagaacat
     801  g