Sequence of DPV Ammi majus latent virus

Ammi majus latent virus gene for polyprotein, partial cds.

ACC No: AB361564

Dated: 2010-06-03 | Length: 1696 | CRC: -501137292

                
ID   AB361564; SV 1; linear; genomic RNA; STD; VRL; 1696 BP.
XX
AC   AB361564;
XX
DT   20-SEP-2008 (Rel. 97, Created)
DT   03-JUN-2010 (Rel. 105, Last updated, Version 3)
XX
DE   Ammi majus latent virus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Ammi majus latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1696
RA   Ueda S., Kim O.;
RT   ;
RL   Submitted (18-SEP-2007) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Shigenori Ueda National Agricultural Institute for Kyushu Okinawa
RL   Region; 1823 Mii, Kurume, Fukuoka 839-8503, Japan
XX
RN   [2]
RA   Kim O.S., Ueda S.;
RT   "First record of Ammi majus latent virus, a member of genus Potyvirus";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1696
FT                   /organism="Ammi majus latent virus"
FT                   /host="Ammi majus"
FT                   /isolate="WF17"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Chiba"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:471359"
FT   CDS             <1. .1470
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B5MET4"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B5MET4"
FT                   /protein_id="BAG71409.1"
FT                   /translation="LVITTGSGNNSGQPSTVVDNTLMVVIALYYSCMKQGLSLQDIMDR
FT                   VIFFANGDDIILAVQESDVWLYDKLGVLFAQLGLNYDFSERTRHREELWFMSHQAKLVD
FT                   GLYIPKLEPERIVSILEWDRSKELMHRTEAICAAMIEAWGHTELLTEIRKFYLWLLQKD
FT                   EFKELAKEGKTPYIAETALRNLYTNKSASMEELRNYVEKFSIDNSFHEHELVSLQSSTV
FT                   EQSAIDAGVDNKEGQDGGSKDKALVASGVQDKDVGASSKGQTIPRLHKITKKMNLPTVK
FT                   GKVILSIDHLIEYKPTQTDLFNTRATKSQFESWYNAIQREYEITDEQMSVIMNGFMVWC
FT                   IDNGTSPDINGVWVMMDGDEQVEYPLKPMVENAKPTLRQIMHHFSDAAEAYIEMRNSEG
FT                   LYMPRYGLLRNLRDRSLARYAFDFYEVNSKTSDRAREAVAQMKAAALVNVNNKLFGLDG
FT                   NISTTSENTERHTARDVNQNMHTLLGVNSLQ"
FT   mat_peptide     <1. .654
FT                   /product="NIb"
FT   mat_peptide     655. .1467
FT                   /product="CP"
XX
SQ   Sequence 1696 BP; 558 A; 283 C; 397 G; 458 T; 0 other;

ab361564 Length: 1696  03-JUN-2010  Type: N  Check: 8833  ..

       1  ctagtgatta ccacaggatc cggcaataat agcggacagc catcaactgt
      51  tgtcgacaac acactaatgg tcgtgatagc attgtactat tcttgtatga
     101  agcaaggatt atcacttcaa gatattatgg atagagtgat ctttttcgcc
     151  aatggtgatg atatcattct ggcagttcaa gaaagtgatg tatggctata
     201  tgacaaactt ggtgtgctgt ttgctcagtt agggctcaat tatgattttt
     251  ctgagcgaac tcggcatcgt gaggaactat ggttcatgtc tcatcaagca
     301  aagctagttg atggacttta tatcccaaag ttggaacctg aaagaattgt
     351  ttcaattctg gaatgggata gaagtaagga gctaatgcat cggacggaag
     401  ctatttgtgc tgcaatgatt gaagcatggg gtcatacaga actcctcact
     451  gagataagga agttttactt gtggcttttg cagaaggatg agttcaagga
     501  gctagcaaaa gaaggaaaaa caccgtacat tgctgagacg gcacttcgca
     551  atttatacac aaataagtca gcaagtatgg aagaattgag aaactatgta
     601  gaaaaatttt ctattgataa tagctttcat gaacatgagc ttgtgtcttt
     651  gcaatcaagc acagtagagc agagtgccat agatgctggg gtggacaaca
     701  aagaaggaca agatggaggt agtaaagata aggcattagt agccagtgga
     751  gtgcaggata aggatgtagg cgcaagttca aaggggcaaa caatcccaag
     801  actccacaag atcactaaga agatgaatct acccacagtc aaaggaaaag
     851  taatactcag catcgatcat ctcatagagt ataaacccac tcaaacagac
     901  ttgttcaata caagagcaac aaagagccaa tttgagtcgt ggtataatgc
     951  aatacagcgg gaatatgaga taactgatga gcaaatgagt gttattatga
    1001  atggtttcat ggtgtggtgc attgataatg gaacatcacc tgacattaat
    1051  ggtgtttggg taatgatgga tggtgatgaa caagttgaat atccattgaa
    1101  accgatggtt gagaatgcaa agccaacact gcggcaaatc atgcaccatt
    1151  tctctgacgc agcggaggca tacattgaaa tgagaaattc cgaaggatta
    1201  tacatgccta ggtatggtct tttgaggaat ttgagggata ggagcttagc
    1251  acgttacgcg ttcgactttt atgaagttaa ctcgaaaacg tcagatagag
    1301  cgcgcgaagc agtcgcgcag atgaaggcag cagccctcgt aaatgttaac
    1351  aacaagttgt ttggacttga tggtaacatt tcaacaacta gtgaaaatac
    1401  agaaaggcac actgcaagag atgtaaacca gaacatgcat actttattag
    1451  gagtaaattc tctgcagtaa agactaggta aactagtcac tgttatcatt
    1501  tcacgtcgtt ttacattata gtaatatata tgaaacgtag cattcgattt
    1551  aatatcatgt tattgtagag tggtttcacc atcttctatg attatattat
    1601  tgtctatgta aagcaggaag aaccataaca atatcggagc ttccagagtg
    1651  attatatcac gcgcgtctgc cgagatacgg ttatgtttgt tgttcc