Sequence of DPV Sweet potato feathery mottle virus
Sweet potato feathery mottle virus gene for polyprotein, NIa-Pro and CP region, partial cds, isolate: 5-O.
ACC No: AB509460
Dated: 2010-05-09 | Length: 1176 | CRC: 2020873758
ID AB509460; SV 1; linear; genomic RNA; STD; VRL; 1176 BP.
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AC AB509460;
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DT 09-MAY-2010 (Rel. 104, Created)
DT 09-MAY-2010 (Rel. 104, Last updated, Version 1)
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DE Sweet potato feathery mottle virus gene for polyprotein, NIa-Pro and CP
DE region, partial cds, isolate: 5-O.
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KW .
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OS Sweet potato feathery mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1176
RA Yamasaki S., Sakai J., Fuji S., Hanada K.;
RT ;
RL Submitted (19-JUN-2009) to the EMBL/GenBank/DDBJ databases.
RL Contact:Shuichi Yamasaki Oita Prefectural Agriculture, Forestry and
RL Fisheries Research Center, Safety Farming Research institute; Kitausa 65,
RL Usa, Oita 872-0103, Japan
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RN [2]
RX PUBMED; 20336334.
RA Yamasaki S., Sakai J., Fuji S., Kamisoyama S., Emoto K., Ohshima K.,
RA Hanada K.;
RT "Comparisons among isolates of Sweet potato feathery mottle virus using
RT complete genomic RNA sequences";
RL Arch. Virol. 155(5):795-800(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .1176
FT /organism="Sweet potato feathery mottle virus"
FT /strain="O"
FT /isolate="5-O"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:12844"
FT CDS <1. .1011
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="BAJ07201.1"
FT /translation="VLNEMYDDSMLQENELEVYHQSGEKTEFKDAGANPPDPKSKINPP
FT PPTITEIVDPEDPKQAALRAARAKQPATIPESYGRDTSKEKESIVGTSSKGVRDKDVNV
FT GTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQYEVANTRSTQEQFQAWYE
FT GVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVP
FT TFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARA
FT KEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
FT mat_peptide <1. .63
FT /gene="NIa-Pro"
FT /product="protease"
FT mat_peptide 64. .1008
FT /gene="CP"
FT /product="coat protein"
FT 3'UTR 1012. .1176
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SQ Sequence 1176 BP; 383 A; 218 C; 276 G; 299 T; 0 other;
ab509460 Length: 1176 09-MAY-2010 Type: N Check: 1002 ..
1 gtgcttaatg aaatgtacga tgatagtatg cttcaagaga atgagttgga
51 agtatatcat caatctggtg agaaaactga atttaaagat gctggagcaa
101 accctccaga ccctaagtcc aagatcaatc ctccaccacc tacaataact
151 gagatcgttg atccggagga cccgaagcaa gcagctttaa gagctgcacg
201 agcaaaacaa cccgcaacca ttccagaatc atatgggcgt gatacgagca
251 aagaaaagga atcaatagtg ggaacatcat caaagggtgt gagagataaa
301 gacgttaatg ttggcacagt tggtacattt gttgtaccac gtgttaagat
351 gaatgcaaat aagaagagac aaccaatggt caatggaaga gccattataa
401 atttccaaca cttgtcaaca tatgaaccag agcagtatga agttgcgaac
451 acccgttcaa cccaagagca attccaagca tggtatgagg gagttaaagg
501 ggattacggt gttgacgaca caggaatggg gatcttattg aatggactaa
551 tggtttggtg cattgaaaat ggcacatccc caaatataaa tggtgtgtgg
601 acaatgatgg acggtgatga gcaagtgaca tatccaatta aaccattgtt
651 ggatcatgca gtgcctactt ttaggcagat tatgacgcac ttcagtgacg
701 ttgctgaagc ctatatagaa atgcgaaacc gtacaaaggc gtacatgcca
751 agatatggtc tacaacgtaa tttgactgat atgagtcttg cgcgatatgc
801 atttgatttt tacgagctgc attcaactac acctgcacgt gctaaagaag
851 cacatttaca gatgaaggca gccgcactta agaatgcgcg aaatcggttg
901 tttggtttgg acggaaacgt ctccacgcaa gaagaagata cggagaggca
951 cacgacaact gatgttacta gaaatataca taacctctta ggaatgaggg
1001 gtgtgcaata ggacatcctc tgcactgtag cttatactta tgttatcttt
1051 agtatgcctt taatttaaat tcgtgtcttt cagtcccgaa ggagatggtt
1101 gaatgcataa catggtggga ttatatctcg gttattgcat ttgagaagtc
1151 acctttctat taccgtatca taaggg