Sequence of DPV Leek yellow stripe virus

Leek yellow stripe virus gene for polyprotein, partial cds.

ACC No: AB551622

Dated: 2010-04-07 | Length: 864 | CRC: -1220091560

                
ID   AB551622; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AB551622;
XX
DT   07-APR-2010 (Rel. 104, Created)
DT   07-APR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Leek yellow stripe virus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Leek yellow stripe virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-864
RA   Natsuaki K., Shitara S.;
RT   ;
RL   Submitted (24-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Keiko T Natsuaki lab. of Tropical Plant Protection; sakuragaoka
RL   1-1-1, setagaya, tokyo 156-8502, Japan
XX
RN   [2]
RA   Shitara S., Natsuaki K.;
RT   "leek yellow stripe virus coat protein region";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /organism="Leek yellow stripe virus"
FT                   /host="Allium sativum"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:42004"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="coat protein region"
FT                   /protein_id="BAJ04729.1"
FT                   /translation="AGEEMDAGTQASKSQRSSADKSIEQRDPTTSQASAHGRIKDANSD
FT                   SSSNKDRDVNVGTTGTFSVPRIKQISQKGLSVPMEKGKSVLNLDHLLQYKPNQLCISNT
FT                   RATRAQFTAWKTRLQEEYGVTNDEMSIILNGLMVWCIENGTSPNINGVWTMMDGEEQVE
FT                   FPLRPVVEHAQPTLRQIMAHFSALAEAYIEMRNAERAYMPRYGLQRNLTDMSLARYAFD
FT                   FYEITSRTPVRAREAHAQMKAAALRNSRPRLFGLDGNVTTTDEDTERHTAHDVNARMHH
FT                   LDGAHMQ"
XX
SQ   Sequence 864 BP; 290 A; 175 C; 217 G; 182 T; 0 other;

ab551622 Length: 864  07-APR-2010  Type: N  Check: 7684  ..

       1  gctggagagg agatggatgc aggcacgcag gctagtaaga gccaaaggag
      51  tagtgcggat aaatctatag agcaacgaga ccctactaca tcacaagcca
     101  gcgcgcatgg gagaattaaa gatgcaaact cagattcgag ctcaaacaaa
     151  gatagggatg taaatgttgg tactacagga accttcagtg ttccaagaat
     201  aaaacaaatt tcacagaagg gtttatcagt gccaatggaa aaaggaaagt
     251  cggtactcaa tctagatcat ctcctacaat acaaacccaa ccaattatgc
     301  atatcaaaca ccagagccac tagagcgcaa ttcacggctt ggaagacaag
     351  attacaggaa gagtatggcg tcaccaatga tgaaatgagt attatcttga
     401  atggtttaat ggtgtggtgc attgagaatg ggacctcgcc aaacataaat
     451  ggagtttgga caatgatgga tggtgaagag caggttgaat ttcctttgcg
     501  acctgtcgtt gaacatgcac aaccaacctt acggcaaata atggcacatt
     551  tctcagcact tgcggaagcc tatatcgaaa tgaggaatgc agagcgagcg
     601  tatatgccaa ggtatggatt acaaaggaat cttacagata tgagtctcgc
     651  gcggtatgca tttgatttct atgaaatcac ttcaagaaca ccagttagag
     701  cgcgcgaagc tcacgcacaa atgaaggcag cagccttgag gaattcaaga
     751  ccacggctgt tcggattaga cggtaatgtc acaaccacgg atgaggacac
     801  ggagaggcac acagcacatg acgtgaatgc acggatgcac catctcgatg
     851  gtgcgcatat gcag