Sequence of DPV Beet necrotic yellow vein virus

Beet necrotic yellow vein virus CP gene for coat protein, complete cds, isolate: O11.

ACC No: AB562982

Dated: 2012-01-22 | Length: 567 | CRC: -2130481750

                
ID   AB562982; SV 1; linear; genomic RNA; STD; VRL; 567 BP.
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AC   AB562982;
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DT   28-OCT-2010 (Rel. 106, Created)
DT   22-JAN-2012 (Rel. 111, Last updated, Version 2)
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DE   Beet necrotic yellow vein virus CP gene for coat protein, complete cds,
DE   isolate: O11.
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KW   .
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OS   Beet necrotic yellow vein virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Benyvirus.
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RN   [1]
RP   1-567
RA   Chiba S., Kondo H., Miyanishi M., Andika I.B., Han C.G., Tamada T.;
RT   ;
RL   Submitted (25-MAY-2010) to the INSDC.
RL   Contact:Hideki Kondo Okayama University, Institute of Plant Science and
RL   Resources; Chu-ou 2-20-1, Kurashiki, Okayama 710-0046, Japan
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RN   [2]
RA   Chiba S., Kondo H., Miyanishi M., Andika I.B., Han C., Tamada T.;
RT   "The evolutionary history of Beet necrotic yellow vein virus deduced from
RT   genetic variation, geographical origin and spread, and the breaking of host
RT   resistance";
RL   Mol. Plant Microbe Interact. 24:207-218(2011).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .567
FT                   /organism="Beet necrotic yellow vein virus"
FT                   /segment="RNA 2"
FT                   /host="Beta vulgaris subsp. vulgaris"
FT                   /isolate="O11"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Hokkaido, Tokachi, Obihiro"
FT                   /collection_date="1991"
FT                   /db_xref="taxon:31721"
FT   CDS             1. .567
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9W914"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="UniProtKB/TrEMBL:Q9W914"
FT                   /protein_id="BAJ23702.1"
FT                   /translation="MSSEGRYMTWKDMSHNKFMTDRWARVSDVVSVIKQSHAMDLSKAA
FT                   NLSIIKTALAGLGSGWTDNNPFVSPMTRFPQTLTMYGALVLYVNLSDPEFALIMTKVST
FT                   LTDSGLADNASANVRRDVVSGNKAESSGKTAGTNENSAYTLTVSLAGLAQALRLEELMW
FT                   TRDKFEDRLKLPWTPVQGRTSPPGQ"
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SQ   Sequence 567 BP; 153 A; 107 C; 141 G; 166 T; 0 other;

ab562982 Length: 567  22-JAN-2012  Type: N  Check: 4962  ..

       1  atgtcgagtg aaggtagata tatgacatgg aaggatatgt cacataataa
      51  gtttatgacc gatcgatggg cccgtgtttc ggacgtcgtg agtgttatta
     101  aacaatcgca tgctatggac ttgtccaagg ctgcgaatct atctataatt
     151  aaaactgctt tggcaggatt gggctcgggt tggactgaca ataatccttt
     201  tgtgtccccg atgacccgtt ttccacagac actaactatg tacggtgcac
     251  ttgtgttata tgttaatctg tctgacccag aatttgcgtt gataatgact
     301  aaggtaagta ctttaactga ttcagggtta gcagataacg catctgctaa
     351  tgtgcgtaga gatgtggtgt ccggaaataa agccgaatca tccggtaaaa
     401  ctgctggcac taatgagaat tctgcttata cgcttaccgt tagtcttgct
     451  ggtttggctc aagctcttag gcttgaggaa ttaatgtgga ctcgggataa
     501  gtttgaggac cggttgaaat taccatggac acctgttcaa ggtagaacca
     551  gtccacccgg acaatag