Sequence of DPV Carrizal virus
Carrizal virus gene for glycoprotein precursor, complete cds, isolate: 26/2006.
ACC No: AB620104
Dated: 2011-03-25 | Length: 3675 | CRC: -1508052045
ID AB620104; SV 1; linear; viral cRNA; STD; VRL; 3675 BP.
XX
AC AB620104;
XX
DT 25-MAR-2011 (Rel. 108, Created)
DT 25-MAR-2011 (Rel. 108, Last updated, Version 1)
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DE Carrizal virus gene for glycoprotein precursor, complete cds, isolate:
DE 26/2006.
XX
KW .
XX
OS Carrizal virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus;
OC unclassified Hantavirus.
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RN [1]
RP 1-3675
RA Kariwa H., Saasa N., Sanchez-Hernandez C., Romero-Almaraz M., Ishizuka M.,
RA Yoshida H., Sanada T., Seto T., Yoshii K., Takashima I.;
RT ;
RL Submitted (17-MAR-2011) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Kariwa Hokkaido University, Graduate School of Veterinary
RL Medicine; Kita-18, Nishi-9, Kita-Ku, Sapporo, Hokkaido 060-0818, Japan
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RN [2]
RA Kariwa H., Saasa N., Sanchez-Hernandez C., Romero-Almaraz M., Yoshida H.,
RA Almazan-Catalan A., Miyashita D., Ishizuka M., Seto T., Sanada T.,
RA Ramos C., Yoshimatsu K., Arikawa J., Yoshii K., Takashima I.;
RT "Genetic identification and characterization of distinct hantaviruses
RT circulating in Mexico";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .3675
FT /organism="Carrizal virus"
FT /segment="M"
FT /host="Reithrodontomys sumichrasti"
FT /isolate="26/2006"
FT /mol_type="viral cRNA"
FT /country="Mexico:Guerrero"
FT /lat_lon="17.36 N 99.49 W"
FT /isolation_source="Lung of Reithrodontomys sumichrasti"
FT /collection_date="12-May-2006"
FT /db_xref="taxon:1000586"
FT CDS 26. .3445
FT /codon_start=1
FT /transl_table=1
FT /product="glycoprotein precursor"
FT /protein_id="BAK08523.1"
FT /translation="MIGWLSLVVWCFTTVFAGYSKTLFELKVECPHTVGLGQGYVTGSA
FT ELGVVPLSEIGNLKLESSCNLDLHAPSNTIQKFTQVEWVKKTSTTDTTNAAATTFETKS
FT KEVSLKGTCTIPINVFETNFKSRKTVLCYDLSCNQTSCQPTVHLIAPIQTCTTMRSCMV
FT GLGSQRIQIIYEKTYCVSGQLLEGLCFIPVHTMALTQPGHTYDVMTVPANCFLVAKKSN
FT NQVKLAVELEKLISKTGCTENGFQGYYVCFLGKQSEPLYVPLLEDFRSAEIFTRMVLNP
FT HGEDHDVELTGQGYMRIAGPANGKVPNTETSDTFQGIAFAGVPMYSSFSTLVRKADPEY
FT IFSPGIIAEANHSVCDKKTVPVTWSGFVPIPGEIERITGCTVFCTLAGPGASCEAYSEN
FT GIFNISSPTCLVNKVQKFRGSEQRINFICQRVDQDIVVYCNGQKKIILTKTLVIGQCIY
FT TLTSLFSLLPGVAHSLAVEMCVPGVHGWATTALLITFCFGWLLIPFITLLILKFLRVLT
FT YSCSHYSSESKFKLILEKVKIEYQKTMGSMVCDICHHECETVKELECHKKSCVDGQCPY
FT CMTLTESTESALQAHFTVCKLTSRFQENLKKSLKRQDIKPGCYRTLGVFRYKSRCYVGL
FT VWGFLLTIELVVWAASADTPLLDPGWTDTAHGVGLIPMKTDLELDFALPSSSSYSYRRM
FT LVNPANTEEKIPFHFQIERQMIHAEIQVLGHWMDATFNIKTAFHCYGDCKRYAYPWQNA
FT KCFFEKDYQYETGWGCNPADCPGVGTGCTACGVYLDKLKSVGKAYKLINLRYTRKVCVQ
FT LGTEQTCKTIDINDCLVTPSLKVCMVGTVSKLQPGDTLLFLGPLEQGGLILKQWCSTTC
FT NFGDPGDIMSTTSGMKCPEHTGSFRKICGFATTPICEYQGNTISGYQRMMATRDSFQSF
FT NVTQPHLTENILEWVDPDSTIKDHINLVLNRDLSFQDLADNPCKVDLHTQSIDGAWGSG
FT VGFTLTCIVGLTECGTFITAIKACDAAMCYGATVSTLVRGTNTVKVVGKGGHSGSLFKC
FT CHDTDCTREGLSATAPHLDRVTGFNQIDSDKVYDDGAPPCTVKCWFKKSGEWLMGIING
FT NWIVVAVLIVILIISILLFSFFCPVRSHKKQQ"
XX
SQ Sequence 3675 BP; 1140 A; 636 C; 759 G; 1140 T; 0 other;
ab620104 Length: 3675 25-MAR-2011 Type: N Check: 8242 ..
1 aaaacagaca aggcaaaaga tcaaaatgat agggtggctc agtctagtcg
51 tgtggtgttt tactactgtt ttcgctggat actctaagac tctgtttgag
101 ctaaaagttg aatgcccaca tacagttgga ttaggacaag gctatgtgac
151 tggatctgct gaattaggtg ttgttccact atctgagatt ggaaatttga
201 agcttgaaag ttcatgtaat ctggatcttc atgcaccttc caatactatt
251 caaaaattta ctcaggttga atgggtgaag aagacaagta caactgatac
301 cacaaatgca gcagccacaa catttgagac aaaatcaaaa gaagtcagcc
351 taaaagggac atgtacaata ccgataaatg tgtttgaaac caatttcaaa
401 tcacgaaaga ctgtactttg ttatgacctt tcttgcaacc aaacaagttg
451 tcaacctact gtacatttaa ttgctccaat ccaaacttgc accaccatga
501 ggagctgcat ggttggtctt gggtcacaaa ggatccaaat catttatgag
551 aagacttact gtgtgtctgg acaactccta gagggtttat gtttcattcc
601 tgtacataca atggccttga cacaaccagg acacacatat gatgtgatga
651 ctgtaccagc aaactgcttc cttgttgcaa agaagtccaa taatcaagta
701 aaactagcag tggaacttga aaaattgatt tcaaaaactg ggtgtacaga
751 aaatgggttt caaggatatt atgtttgttt tttagggaag caatccgagc
801 ccttatatgt cccattatta gaggacttca ggtctgcaga gatattcact
851 cggatggttt taaatcctca tggggaagat catgatgtgg aattaactgg
901 tcagggttat atgaggattg cagggcctgc aaatgggaaa gtcccaaata
951 cagaaacatc tgatacattt caaggaattg catttgctgg tgtaccaatg
1001 tatagttcct tttcaacttt agtgagaaag gcagatcctg aatatatttt
1051 ctctccagga attattgctg aagcaaacca tagtgtgtgt gataagaaaa
1101 ctgtgcctgt gacttggagt ggatttgtac caatccctgg tgaaattgag
1151 cgaattactg gctgtactgt tttttgtacc cttgcaggac ctggagcatc
1201 gtgtgaagca tattctgaaa atggtatatt taatataagc tcaccaacat
1251 gtcttgtcaa taaagtccaa aaatttagag ggtctgaaca acggataaac
1301 ttcatttgtc agcgtgttga tcaggacata gtagtatatt gtaatggaca
1351 aaaaaagatt atattgacaa aaacactagt tataggccaa tgcatttata
1401 ctcttaccag ccttttctca cttttgcctg gtgttgccca ttccctggct
1451 gttgaaatgt gtgtaccggg agttcatggc tgggcaacta cagcccttct
1501 aatcacattt tgtttcggat ggcttttgat cccatttatt actttattga
1551 ttctaaagtt tctaagggtt ttgacatatt cttgctcgca ttactcttca
1601 gagtcaaaat tcaagttaat tttggaaaaa gtaaaaattg agtatcagaa
1651 gacaatgggt tcaatggttt gtgatatttg tcatcatgag tgcgaaactg
1701 tgaaagaact agagtgccat aaaaaaagct gtgtggatgg gcaatgccct
1751 tactgcatga cactgacaga gtccactgaa agtgcccttc aagcccattt
1801 tacagtttgt aagcttacat ctaggtttca ggaaaattta aagaagtcat
1851 taaaacgaca agacattaaa ccaggttgtt atagaacact gggcgttttt
1901 aggtataaaa gtcgttgtta tgtcggactt gtatggggct ttttgttgac
1951 tatcgagcta gtagtttggg ctgctagtgc agatacacca ctcttggatc
2001 ctggatggac tgatactgct catggtgtag ggctcatccc catgaaaaca
2051 gacttagaat tagattttgc actaccttca tcctcctcat acagttatcg
2101 acgaatgtta gtcaaccctg caaatacaga ggaaaaaatc cctttccatt
2151 ttcaaattga aaggcaaatg attcatgcag aaattcaagt cctaggtcat
2201 tggatggatg ctacatttaa tatcaagact gcatttcatt gctatggtga
2251 ctgtaaaaga tatgcatatc catggcagaa tgcaaaatgt ttttttgaaa
2301 aggattatca gtatgagacc gggtggggtt gtaatccggc agactgccct
2351 ggggtaggaa caggttgcac tgcttgtgga gtgtatcttg ataagcttaa
2401 gtcagtaggt aaggcatata agttaataaa tttaagatat actagaaagg
2451 tttgtgtgca actaggtact gagcagacgt gtaaaacaat agacattaat
2501 gattgtcttg ttacaccttc attaaaagtc tgtatggtgg gaacagtatc
2551 taaactgcaa ccaggtgaca cacttctgtt ccttggaccc ttagaacaag
2601 gtggtttgat tctcaaacaa tggtgttcaa caacatgtaa ctttggtgac
2651 cctggagata tcatgtcgac aacatcggga atgaaatgtc cagaacacac
2701 tggttctttt agaaagattt gtggtttcgc aactacacct atttgtgaat
2751 atcaaggtaa tactatctca ggttatcaga gaatgatggc tacaagagat
2801 tcatttcagt cttttaatgt cacgcaaccc catttaacag aaaacattct
2851 tgaatgggta gatcctgaca gtactataaa agatcacata aatttagtgc
2901 ttaatagaga tctgtctttt caggatttgg cagataatcc ctgtaaggta
2951 gacctccaca cacaaagtat tgatggggct tggggttctg gagttggttt
3001 taccttaaca tgcatagttg gcctaacaga atgtggtaca tttataacag
3051 ctattaaagc atgtgatgca gcaatgtgtt atggtgcaac agtaagtact
3101 cttgttcggg gaacaaatac tgttaaagtt gtaggtaaag gtggacattc
3151 aggatccctt tttaaatgct gtcatgatac tgattgcaca agagaagggt
3201 tgagtgcgac agccccccat ttagatcgtg tcacagggtt taaccaaatt
3251 gactctgaca aagtatatga tgacggagca ccaccgtgca ctgtgaaatg
3301 ttggtttaag aagtctggag agtggttgat gggaataatt aacggaaact
3351 ggattgttgt agctgtctta attgttatct taatcatatc aatcctgctc
3401 tttagctttt tttgtccagt tagaagtcac aagaaacaac aataacttca
3451 aatacatgtg agagcttatc atttaattcg tcactactta taatattatt
3501 atgaaactaa tagtctttag aagttttaac tatagttact caaaaatgta
3551 tgcctgttta tttatattca tttattgctt atttacttta taatctgtta
3601 ttcacttata ctaaatatta aaaaaaacta aacctttatc aatatataaa
3651 tcatatttct cataccgagg ctttt