Sequence of DPV Huitzilac virus
Huitzilac virus gene for glycoprotein precursor, complete cds, isolate: 200/2006.
ACC No: AB620107
Dated: 2011-03-25 | Length: 3655 | CRC: 1147371474
ID AB620107; SV 1; linear; viral cRNA; STD; VRL; 3655 BP.
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AC AB620107;
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DT 25-MAR-2011 (Rel. 108, Created)
DT 25-MAR-2011 (Rel. 108, Last updated, Version 1)
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DE Huitzilac virus gene for glycoprotein precursor, complete cds, isolate:
DE 200/2006.
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KW .
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OS Huitzilac virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus;
OC unclassified Hantavirus.
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RN [1]
RP 1-3655
RA Kariwa H., Saasa N., Sanchez-Hernandez C., Romero-Almaraz M., Ishizuka M.,
RA Yoshida H., Sanada T., Seto T., Yoshii K., Takashima I.;
RT ;
RL Submitted (17-MAR-2011) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Kariwa Hokkaido University, Graduate School of Veterinary
RL Medicine; Kita-18, Nishi-9, Kita-Ku, Sapporo, Hokkaido 060-0818, Japan
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RN [2]
RA Kariwa H., Saasa N., Sanchez-Hernandez C., Romero-Almaraz M., Yoshida H.,
RA Almazan-Catalan A., Miyashita D., Ishizuka M., Seto T., Sanada T.,
RA Ramos C., Yoshimatsu K., Arikawa J., Yoshii K., Takashima I.;
RT "Genetic identification and characterization of distinct hantaviruses
RT circulating in Mexico";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .3655
FT /organism="Huitzilac virus"
FT /segment="M"
FT /host="Reithrodontomys megalotis"
FT /isolate="200/2006"
FT /mol_type="viral cRNA"
FT /country="Mexico:Morelos"
FT /lat_lon="19.03 N 99.14 W"
FT /isolation_source="Lung of Reithrodontomys megalotis"
FT /collection_date="19-May-2006"
FT /db_xref="taxon:1000587"
FT CDS 26. .3445
FT /codon_start=1
FT /transl_table=1
FT /product="glycoprotein precursor"
FT /protein_id="BAK08526.1"
FT /translation="MMGWLSLVVWCFTTVVTGYSKNLFELKIECPHTVGLGQGYVTGSA
FT ELGIIPLSEVGDLKIESSCNLDLHTPSNTVQKFTQVEWVKKTSTTDTTNAAATTFETKS
FT KEVNLKGTCTIPINVFETNFKSRKTVLCYDLSCNQTSCQPTVHLIAPIQTCTTMRSCMV
FT GLGSQRIQVIYDKTYCVSGQLLEGLCFIPVHTMALTQPGHTYDIMTVPASCFLVAKKSN
FT NQVKLAVELEKLISKTGCTENGFQGYYVCFLGKQSEPLYVPLLEDFRSAEVFTRMVLNP
FT HGEDHDVELAGQGYMRIAGPINGKVPHTETTDTLQGIAFAGVPMYSSFSTLVRKADPEY
FT VFSPGIIAEANHSVCDKKTVPITWNGFVPIPGEIERITGCTVFCTLAGPGASCEAYSEN
FT GIFNISSPTCLVNKVQKFRGSEQRINFVCQRVDQDIIVYCNGQKKIILTKTLVIGQCIY
FT TLTSLFSLLPSVAHSLAVEMCVPGVHGWATTALLITFCFGWLLIPFVTLIILKVLRILT
FT YSCSHYSSESKFKLILEKVKVEYQKTMGSMVCDICHHECETAKELECHKKSCPDGQCPY
FT CMTLTESTESALQAHYAICKLTTRFQENLKKSLKKQDIKPGCYRTLGVFRYKSRCYVGL
FT VWGCLLTIELVIWAASADTPLLDPGWTDTAHGVGIIPMKTDLELDFALPSSSSYSYRRT
FT LVNPANGDERIPFHFQMERQTVHADIQPLGHWMDATFNIKTAFHCYGECKRYAYPWQSA
FT KCFFEKDYQYETGWGCNPADCPGVGTGCTACGIYLDKLKSVGKAYKVVNLRYTRKVCVQ
FT LGTEQTCKTIDVNDCLVTPSLKVCMIGTVSKLQPGDTLLFLGPLEQGGLILKQWCSTTC
FT NFGDPGDIMSTTSGMKCPEHTGSFRKICGFATTPICEYQGNTVSGYQRMMATKDSFQSF
FT NVTQPHLTANLLEWIDPDSTIKDHINLVLNRDLSFQDLADNPCKIDLHTQSIDGAWGSG
FT VGFTLTCTVSLTECSTFITSIKACDAAMCYGATVSTLVRGTNTVKVVGKGGHSGSLFKC
FT CHDNDCTATGLSATAPHLDRVTGYNQIDSDKVYDDGAPPCTMKCWFTKSGEWLLGIING
FT NWVVVAVLIVILIISILLFSFFCPIRSHKKQH"
XX
SQ Sequence 3655 BP; 1125 A; 700 C; 780 G; 1050 T; 0 other;
ab620107 Length: 3655 25-MAR-2011 Type: N Check: 1478 ..
1 aagacagaag aggcaaacaa tcaaaatgat gggttggctc agtcttgtcg
51 tgtggtgctt tactactgtt gtgacaggct actccaaaaa cctctttgag
101 ttaaaaattg aatgtccgca tactgttggt ttaggacaag gctatgtgac
151 aggctcagca gaattaggta taataccatt gtcagaggtt ggggatctaa
201 aaattgaaag ctcatgtaat ctggatctcc atacaccatc aaacactgtt
251 cagaaattta cacaggttga gtgggtgaag aagacaagca caactgatac
301 tacaaatgct gctgcaacca catttgaaac gaaatcaaag gaagtcaatc
351 taaagggaac atgcacaatt ccaatcaatg tgtttgagac aaactttaaa
401 tccaggaaaa cagtgctgtg ttatgacctt tcttgcaacc aaacgagttg
451 tcagcctact gtacatttaa ttgctcctat ccaaacttgt acaacaatga
501 gaagctgcat ggtaggattg ggttcccaga gaattcaagt catttatgac
551 aaaacttatt gtgtgtcagg acaacttttg gaaggattat gctttatccc
601 agtccataca atggcattga cacaaccagg gcatacatat gatatcatga
651 cagtccctgc aagttgtttc cttgtcgcaa aaaaatcaaa caatcaagta
701 aagctggcag ttgaacttga gaagctgatt tctaagactg gatgtactga
751 aaatggtttt caaggttatt atgtttgttt tttaggaaaa cagtcagaac
801 cactttatgt gccattactg gaggatttcc gttcagctga ggtgtttaca
851 aggatggtat tgaacccgca tggtgaagat catgacgttg agctggcagg
901 ccaaggttac atgaggattg cagggcccat taatggaaaa gtcccccaca
951 cagagacaac tgatacactc caagggattg catttgctgg tgtccccatg
1001 tatagttcat tttctacatt agttagaaag gcagatcctg aatatgtatt
1051 ttcaccagga ataattgctg aggcgaatca cagtgtatgt gataaaaaaa
1101 cagtccctat aacatggaac ggttttgtcc caatccctgg tgaaattgaa
1151 cgcatcacag gatgtacagt cttttgcacc ttggcaggtc ccggggcttc
1201 atgtgaagca tattcagaaa atgggatatt caacattagt tcaccaacat
1251 gtcttgtcaa taaagttcaa aaattcagag gctcggaaca gagaattaat
1301 tttgtttgtc aacgggtgga tcaagacata attgtatatt gtaatggtca
1351 aaaaaagatt atccttacaa agacattagt aatagggcaa tgcatctaca
1401 cactcacaag ccttttttca ttactcccta gtgtagctca ttcactggca
1451 gttgagatgt gtgtgcctgg tgtgcatggc tgggccacaa cagctttact
1501 tatcacattc tgttttgggt ggctcttaat tccgtttgtc acgttgatca
1551 tactgaaggt gcttaggatt ctaacatact cctgctctca ttattcatca
1601 gagtcaaaat ttaagctaat tctagaaaaa gtgaaggttg agtatcagaa
1651 aactatgggt tccatggtat gtgatatctg ccatcatgaa tgtgagacag
1701 ctaaagaact tgagtgccat aaaaaaagct gcccggatgg gcaatgccca
1751 tactgcatga ctttgacaga gtctactgag agtgcccttc aagctcatta
1801 tgcaatctgt aaattaacaa cacgttttca ggaaaatttg aaaaaatctc
1851 taaaaaagca ggacatcaaa cctggctgtt acagaacact tggagtgttc
1901 cggtataaaa gccgttgcta tgttgggctt gtgtggggct gtctattgac
1951 tattgaacta gtaatatggg ctgcaagtgc tgacacccca ttactggacc
2001 caggctggac agacactgct catggtgttg gaatcatacc catgaaaacc
2051 gatctagagc ttgattttgc attgccatca tcctcatctt acagctaccg
2101 caggacacta gtgaatcctg caaatgggga tgaaagaatc ccatttcact
2151 tccagatgga acgacaaaca gtacatgcag acatccaacc acttggtcat
2201 tggatggatg ctacatttaa cattaaaact gccttccatt gctatggaga
2251 atgtaaaagg tatgcatatc cttggcaaag tgcaaaatgt ttttttgaaa
2301 aggattatca atatgagact ggctggggtt gtaacccagc agactgccca
2351 ggggtgggga caggttgtac tgcatgtgga atctacctgg ataagttgaa
2401 atcagtagga aaggcatata aggtagtgaa cttaagatat acaaggaaag
2451 tgtgtgttca acttgggaca gaacaaacct gcaaaacgat tgatgttaac
2501 gactgtcttg tgacaccttc ccttaaagta tgcatgatcg gaacagtctc
2551 aaaattgcaa cccggtgata cactattgtt cctaggacct ttagaacagg
2601 gtggtttaat actcaaacaa tggtgctcaa caacatgtaa ttttggtgac
2651 cctggtgata tcatgtctac aacatctggg atgaagtgtc ctgagcatac
2701 aggttcattt aggaaaatct gtggttttgc aacaacacct atttgcgaat
2751 accaagggaa tacagtatca ggctaccaaa ggatgatggc tacaaaagat
2801 tcattccaat cttttaatgt cacacagccc catcttacag caaacttatt
2851 agagtggata gatccagata gtacaataaa agaccatatt aatttagtac
2901 ttaataggga tctatctttc caggatttag ctgacaaccc atgtaagata
2951 gacctccata cacaaagcat agatggtgca tggggatctg gtgtgggctt
3001 cacattgacc tgtacggtaa gcttgacaga gtgcagtaca tttatcacat
3051 ctattaaagc gtgtgatgca gcaatgtgct atggggcgac tgttagtacc
3101 ctggttcggg gaacaaacac tgttaaggtg gttggcaaag gtggacattc
3151 tgggtcttta tttaagtgct gccatgacaa tgattgtact gccaccgggc
3201 tcagtgcaac agcaccccat cttgatcggg tgacaggata caaccagatt
3251 gactctgata aagtttatga tgatggagca cccccttgca caatgaaatg
3301 ttggttcacc aagtcaggag aatggcttct gggtataatc aatggaaatt
3351 gggtggttgt tgctgtcctt attgtcattc taattatatc tatcctgctt
3401 ttcagctttt tttgccctat tcgaagtcat aagaagcagc attaaatgac
3451 actggatttg ctttgggtca gtattatctt tagatgtaag catatattaa
3501 tgaactaaca attatattta ttatattcat gtatgtgtag ccgctgtaac
3551 tatttatctt tctaacttca aatccagatg taagcctata tcatttatca
3601 aaaaaaacta caccttcact aacatataaa tcatatttct cataccgagg
3651 ctttt