Sequence of DPV Rembrandt tulip breaking virus

Rembrandt tulip-breaking virus gene for polyprotein, partial cds.

ACC No: AB674535

Dated: 2011-11-27 | Length: 1094 | CRC: -149049155

                ID   AB674535; SV 2; linear; genomic RNA; STD; VRL; 1094 BP.
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AC   AB674535;
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DT   10-OCT-2011 (Rel. 110, Created)
DT   27-NOV-2011 (Rel. 110, Last updated, Version 3)
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DE   Rembrandt tulip-breaking virus gene for polyprotein, partial cds.
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KW   .
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OS   Rembrandt tulip-breaking virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1094
RA   Yamamoto H., Senda M.;
RT   ;
RL   Submitted (05-OCT-2011) to the INSDC.
RL   Contact:Hideki Yamamoto Akita Prefectural Agriculture, Forestry and
RL   Fisheries Research Center, Plant Protection Group, Agricultural Experiment
RL   Station; Yuwa-aikawa, Akita, Akita 010-1231, Japan
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RN   [2]
RA   Yamamoto H.;
RT   "Rembrandt tulip breaking virus detected from lily in Akita Prefecture,
RT   Japan";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1094
FT                   /organism="Rembrandt tulip-breaking virus"
FT                   /host="Lilium sp. (Asiatic hybrid)"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Akita, Akita"
FT                   /isolation_source="lily leaf"
FT                   /collection_date="Jul-2009"
FT                   /db_xref="taxon:32623"
FT   CDS             <1. .882
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAL03777.2"
FT                   /translation="QGELEKYLSQLDLLEELEGPEEVIFQANETLNAGAASTSRTPPAT
FT                   QAGAGSSQLITRDRDVDAGTVGTFQVPRIQKLAARLAVPKISGRILINLDHLINYNPEQ
FT                   VDISNTRASQHQFASWYEGVKLDYGLEDAGMAIILNGFMVWCIENGTSPNINGMWVIMD
FT                   GTDQVEYPLRPMIEHAKPTLRQIMAHFSPLAEAYIEKQNLERPYMPRYGLQRNLTDFGL
FT                   ARYAFDFYEMNSKTPQRAREAHIQMKAAALRGARTKLFGLDGKVTTQDEDTERHTTDDV
FT                   NAKMHSLLGVNM"
FT   mat_peptide     <1. .78
FT                   /product="NIb protein"
FT   mat_peptide     79. .879
FT                   /product="coat protein"
XX
SQ   Sequence 1094 BP; 301 A; 240 C; 281 G; 272 T; 0 other;

ab674535 Length: 1094  27-NOV-2011  Type: N  Check: 9336  ..

       1  caaggggaat tggagaaata cctttcacag ctggatttat tggaggagct
      51  tgaaggacca gaggaagtta tttttcaagc caacgagact ctgaacgcgg
     101  gggccgcaag tacttcgcga acaccaccgg caacgcaagc gggagctggc
     151  tctagtcagc taataacgcg ggaccgtgat gtggacgcag gtacagttgg
     201  aacgtttcag gttccccgta ttcagaaact cgcagctcgg cttgctgtac
     251  ctaagattag tggtcgtata ttaataaatc tagaccacct gataaactac
     301  aacccggagc aagttgatat atcaaacacg cgtgctagtc aacatcagtt
     351  cgcatcatgg tatgaaggcg tcaagctgga ttatggtctt gaggatgctg
     401  gcatggcaat tattttgaac gggttcatgg tgtggtgcat agagaatggc
     451  acctcaccaa acataaatgg catgtgggtc atcatggatg gtaccgatca
     501  agtcgagtat ccattacgtc caatgataga acacgcgaaa cccactttgc
     551  gccagatcat ggcgcacttt tcacctctcg ctgaagctta cattgaaaag
     601  cagaatttgg agagaccgta tatgccaaga tacggacttc agcgaaacct
     651  cacggacttc ggattggcac gatatgcatt cgacttctat gaaatgaatt
     701  ccaaaacgcc gcaacgcgct agggaagctc atattcagat gaaggcagcc
     751  gcactacgtg gggcgcgcac gaagctattc gggctggacg ggaaagtgac
     801  cacacaggat gaggacacgg agaggcacac tacagacgat gttaatgcaa
     851  agatgcactc ccttttggga gttaacatgt agtgtgattc ggaaggagta
     901  ttactattag ttacttgagc tattatatat agtttacttt tctcgtagaa
     951  tcctattcta tagcccaact ttttgtgttt tagtgtgggt ctccacgata
    1001  gcacattgta gctgggattc gaacccttag gccggacctg tttgcagaga
    1051  ggtttacctc gcgtctttca aatctagctt cttgggcgag agac