Sequence of DPV Chilli veinal mottle virus

Chilli veinal mottle virus gene for polyprotein, coat protein region, partial cds, strain: 2.

ACC No: AB703256

Dated: 2012-03-28 | Length: 953 | CRC: -1293293338

                
ID   AB703256; SV 1; linear; genomic RNA; STD; VRL; 953 BP.
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AC   AB703256;
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DT   28-MAR-2012 (Rel. 112, Created)
DT   28-MAR-2012 (Rel. 112, Last updated, Version 1)
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DE   Chilli veinal mottle virus gene for polyprotein, coat protein region,
DE   partial cds, strain: 2.
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KW   .
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OS   Chilli veinal mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-953
RA   Manzila I., Hidayat S.H., Mariska I., Sujiprihati S.;
RT   ;
RL   Submitted (12-MAR-2012) to the INSDC.
RL   Contact:Ifa Manzila 1Indonesian Center for Agricultural Biotechnology and
RL   Genetic Resources Research and Development (ICABIOGRAD), Phytopatology;
RL   Tentara pelajar No 3A, Bogor, West Java 16111, Indonesia
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RN   [2]
RA   Manzila I., Hidayat S.H., Mariska I., Sujiprihati S.;
RT   "Chilli Veinal Mottle Potyvirus (ChiVMV) the causal agent of mottle
RT   diseases on Chilli Pepper (Capsicum annuum L.): Isolates diversity";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .953
FT                   /organism="Chilli veinal mottle virus"
FT                   /host="Capsicum annuum"
FT                   /strain="2"
FT                   /mol_type="genomic RNA"
FT                   /country="Indonesia:Karadenan Jawa Tengah"
FT                   /collected_by="Ifa Manzila"
FT                   /db_xref="taxon:52280"
FT   CDS             <1. .>953
FT                   /codon_start=3
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAL73009.1"
FT                   /translation="HGKSDISLYLRALIEGARREELDDEGGEVTHQSGESVDAGRVKGE
FT                   DSSNKSADKQATDKKSKVQAQPQTRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGISSKL
FT                   TIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQIILN
FT                   GLMVWCIENGTSPNINGYWVMMDGDEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEAYIE
FT                   KRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGVSNR
FT                   MFGLDGRVSTQEEDTERHTAEDVNRNMHNLLGVRGL"
FT   mat_peptide     <1. .>953
FT                   /product="coat protein"
XX
SQ   Sequence 953 BP; 325 A; 166 C; 232 G; 230 T; 0 other;

ab703256 Length: 953  28-MAR-2012  Type: N  Check: 9592  ..

       1  aacatggaaa aagtgatatc agcctatatc tgagagcact tattgaagga
      51  gctaggaggg aagaattaga tgatgagggt ggagaagtta cccatcagtc
     101  gggagagagt gttgatgctg gaagagtaaa aggtgaagat tcttcaaaca
     151  agtcagctga taaacaagcc acagataaga agagcaaggt acaagctcaa
     201  ccacaaactc gtcagagcga aatggaagta cctcaagttc gggacagaga
     251  tgttaatgtt ggaacctcag ggacattcac aataccgcgt ctcaagggta
     301  tttcttcgaa gttaacaata ccaaagatta aaacaaaggc tgttgttaac
     351  cttgaacacc ttcttgatta tgctcctgag caaatacatt tgagtaatac
     401  aagggcatta caatcacaat ttgcatcctg gtatgaaggt gttaagaatg
     451  actatgatgt cacagatgaa cagatgcaaa taatactgaa tggattgatg
     501  gtttggtgta ttgagaatgg aacgtcacca aacataaatg gttattgggt
     551  tatgatggat ggagatgaac aagttgaata tccaataaag ccattgattg
     601  atcatgccaa accatcattt agacaaatca tggcgcattt tagcaatctt
     651  gctgaagcgt atattgagaa gcgcaattct gagaagcctt atatgccaag
     701  atatgggctt caacgaaacc ttaccgatat gtcattagcg cgatatgctt
     751  tcgatttcta tgaaatgaca tcgaaaactc ccgtccgagc tcgtgaggca
     801  cacattcaaa tgaaggcagc tgcattacgt ggcgtcagca acaggatgtt
     851  cggactggac ggtagggtaa gcacacagga agaggacact gaacgacata
     901  cagcagagga tgtaaataga aatatgcaca acctgttggg cgttcgggga
     951  ttg