Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus V1, C3, C2 genes for coat protein, C3 protein, C2 protein, partial and complete cds, isolate: Kure.
ACC No: AB730586
Dated: 2012-06-21 | Length: 1220 | CRC: 607900574
ID AB730586; SV 1; linear; genomic DNA; STD; VRL; 1220 BP.
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AC AB730586;
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DT 21-JUN-2012 (Rel. 113, Created)
DT 21-JUN-2012 (Rel. 113, Last updated, Version 1)
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DE Tomato yellow leaf curl virus V1, C3, C2 genes for coat protein, C3
DE protein, C2 protein, partial and complete cds, isolate: Kure.
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KW .
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OS Tomato yellow leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1220
RA Matsuura S., Hoshino S.;
RT ;
RL Submitted (18-JUN-2012) to the INSDC.
RL Contact:Shohei Matsuura Hiroshima prefectural technology research
RL institute, Agricultural technology research center, Environment research
RL division; Hachihonmatsu Hara 6869, Higashihiroshima, Hiroshima 739-0151,
RL Japan
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RN [2]
RA Matsuura S.;
RT "Tomato yellow leaf curl virus isolate Kure";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .1220
FT /organism="Tomato yellow leaf curl virus"
FT /host="Solanum lycopersicum"
FT /isolate="Kure"
FT /mol_type="genomic DNA"
FT /country="Japan:Hiroshima, Kure, Kurahashi"
FT /isolation_source="isolated from cultivated tomato plant in
FT Hiroshima"
FT /collection_date="30-May-2012"
FT /db_xref="taxon:10832"
FT CDS <1. .695
FT /codon_start=3
FT /transl_table=1
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="BAM24689.1"
FT /translation="SRAAVPIVQGTNKRRSWTYRPMYRKPRIYRMYRSPDVPRGCEGPC
FT KVQSYEQRDDIKHTGIVRCVSDVTRGSGITHRVGKRFCVKSIYFLGKVWMDENIKKQNH
FT TNQVMFFLVRDRRPYGSSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRKFHATVIGG
FT PSGMKEQALVKRFFKINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATMKIRI
FT YFYDSISN"
FT CDS complement(692. .1096)
FT /codon_start=1
FT /transl_table=1
FT /gene="C3"
FT /product="C3 protein"
FT /protein_id="BAM24690.1"
FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI
FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN
FT VIRSIDHVLYDVLENTINVTETHDIKYKFY"
FT CDS complement(837. .>1220)
FT /codon_start=1
FT /transl_table=1
FT /gene="C2"
FT /product="C2 protein"
FT /protein_id="BAM24691.1"
FT /translation="SHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYLHLNCNNHGFT
FT HRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQHQEGHGDS
FT QMFSQLPNLDDITASDWSFLKSI"
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SQ Sequence 1220 BP; 355 A; 216 C; 270 G; 379 T; 0 other;
ab730586 Length: 1220 21-JUN-2012 Type: N Check: 9084 ..
1 gcagccgtgc tgctgtcccc attgtccaag gcacaaacaa gcgacgatca
51 tggacgtaca ggcccatgta ccgaaagccc agaatataca gaatgtatcg
101 aagccctgat gttccccgtg gatgtgaagg cccatgtaaa gtccagtctt
151 atgagcaacg ggatgatatt aagcatactg gtattgttcg ttgtgttagt
201 gatgttactc gtggatctgg aattactcac agagtgggta agaggttctg
251 tgttaaatcg atatattttt tagggaaagt ctggatggat gaaaatatca
301 agaagcagaa tcacactaat caggtcatgt tcttcttagt ccgtgataga
351 aggccctatg gaagcagccc aatggatttt ggacaggttt ttaatatgtt
401 cgataatgag cccagtaccg caaccgtgaa gaatgatttg cgggataggt
451 ttcaagtgat gaggaaattt catgctacag ttattggtgg accctctgga
501 atgaaggaac aggcattagt taagagattt tttaaaatta acagtcatgt
551 aacttataat catcaggagg cagccaagta cgagaaccat actgaaaacg
601 ccttgttatt gtatatggca tgtacgcatg cctctaatcc agtgtatgca
651 actatgaaaa tacgcatcta tttctatgat tcaatatcaa attaataaaa
701 tttatatttt atatcatgag tttctgttac atttattgtg ttttcaagta
751 catcatacaa tacatgatct attgatctga ttacattgtt aatggaaatt
801 acaccaagac tatctaaata cttaagaact tcatatctaa atactcttaa
851 gaaatgacca gtctgaggct gtaatgtcgt ccaaattcgg aagttgagaa
901 aacatttgtg aatccccatg accttcctga tgttgtggtt gaatcttatc
951 tgaatggaaa tgatgtcgtg gttcattaga aatggcctct ggctgtgttc
1001 tgttatcttg aaatagaggg gattgtttat ctcccagata aaaacgccat
1051 tctctgcctg aggagcagtg atgagttccc ctgtgcgtga atccatgatt
1101 attgcagttg aggtggagat agtatgagca gccacagtct aggtctatac
1151 gcttacgcct tattggtttc ttcttggcta tcttgtgttg gaccttgatt
1201 gatacttgcg aacagtggct