Sequence of DPV Bean common mosaic necrosis virus

Bean common mosaic necrosis virus mRNA for coat protein, partial cds, strain: BCMV.

ACC No: AB735585

Dated: 2012-08-07 | Length: 789 | CRC: -1240490671

                
ID   AB735585; SV 1; linear; mRNA; STD; VRL; 789 BP.
XX
AC   AB735585;
XX
DT   26-JUL-2012 (Rel. 113, Created)
DT   07-AUG-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Bean common mosaic necrosis virus mRNA for coat protein, partial cds,
DE   strain: BCMV.
XX
KW   .
XX
OS   Bean common mosaic necrosis virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-789
RA   Pudashini B.J., Pinili M.S., Muhammad S.S., Natsuaki K.T.;
RT   ;
RL   Submitted (13-JUL-2012) to the INSDC.
RL   Contact:Bhuvan Jung Pudashini Tokyo University of Agriculture,
RL   International Agriculture Development; Sakuragaoka, Setaya, Tokyo 156-8502,
RL   Japan E-mail :bhuvan_3@hotmail.com
XX
RN   [2]
RA   Pudashini B.J., Pinili M.S., Muhammad S.S., Natsuaki K.T.;
RT   "First characterization of Bean common mosaic necrosis virus from sweet
RT   bean (Lablab purpureus .L) in Nepal";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .789
FT                   /organism="Bean common mosaic necrosis virus"
FT                   /host="Lablab purpureus .L"
FT                   /strain="BCMV"
FT                   /serotype="BCMV-A"
FT                   /mol_type="mRNA"
FT                   /country="Nepal:Pokhara, Malepatn research centre"
FT                   /isolation_source="legume"
FT                   /collected_by="Bhuvan Jung Pudashini"
FT                   /collection_date="26-Dec-2010"
FT                   /db_xref="taxon:43240"
FT   CDS             <1. .789
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAM34499.1"
FT                   /translation="QSGRKEDEKDAGADKTKESKGKGSADRDVGTGSKGKVVPRLQKIT
FT                   KKMNLPMVGGRMILNLDHLIDYKPQQTDLYNTRATKAQFERWYEAVKAEYELDDQQMGV
FT                   VMNGFMVWCVDNGTSPDVNGVWVMMEGDEQIEYPLKPMVENAKPTLRQIMHHFSDAAEA
FT                   YIEMRNSEGFYMPRYGLLRNLRDKSLARYAFDFYEVNSKTSDRAREAVAQMKAAALANV
FT                   NTRLFGLDGNVATTSENTERHTARDVNQNMHHLLGMTSGQ"
FT   mat_peptide     <1. .786
FT                   /product="coat protein"
XX
SQ   Sequence 789 BP; 269 A; 140 C; 213 G; 167 T; 0 other;

ab735585 Length: 789  07-AUG-2012  Type: N  Check: 408  ..

       1  caatctggaa ggaaggagga tgagaaagat gctggagcag acaaaacaaa
      51  ggagagcaaa ggaaaaggct cagcagatag agatgttgga actggctcga
     101  aaggaaaagt ggtaccaagg ctgcagaaaa ttaccaaaaa gatgaatttg
     151  ccaatggttg gtggaagaat gattctaaat ttggatcacc tgattgacta
     201  caagccgcag caaacggatt tgtacaacac aagagcaact aaggctcaat
     251  tcgaaaggtg gtacgaagca gtcaaggcag aatatgagct tgatgaccaa
     301  cagatgggag tagtgatgaa tggcttcatg gtgtggtgtg ttgacaacgg
     351  aacatctcct gacgtgaatg gagtgtgggt gatgatggaa ggagatgaac
     401  aaatagaata cccactgaag ccaatggttg agaatgcaaa gcctacgctg
     451  cgacaaatca tgcaccattt ctcagatgca gcagaggctt atatagagat
     501  gagaaattcc gaagggttct acatgcctag gtatggactc cttcggaatt
     551  tgagggataa aagcttggct cgatatgcat tcgattttta tgaggttaac
     601  tcaaaaactt cagacagagc cagagaagca gttgctcaga tgaaagcagc
     651  agccctcgcc aacgttaaca ctagattgtt tggtctggat ggaaacgtgg
     701  caacaaccag cgagaatact gaaaggcaca ctgcacggga cgtcaaccag
     751  aatatgcatc atttacttgg tatgacttcc ggacagtaa