Sequence of DPV Sugarcane mosaic virus

Sugarcane mosaic virus coat protein gene, partial cds.

ACC No: AF006728

Dated: 1998-05-29 | Length: 942 | CRC: -466483606

                !!NA_SEQUENCE 1.0
ID   AF006728   standard; RNA; VRL; 942 BP.
XX
AC   AF006728;
XX
SV   AF006728.1
XX
DT   29-MAY-1998 (Rel. 55, Created)
DT   29-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus coat protein gene, partial cds.
XX
KW   .
XX
OS   sugarcane mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-942
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the coat protein coding region of twelve sugarcane
RT   mosaic potyvirus isolates from Australia, USA and South Africa";
RL   Unpublished.
XX
RN   [2]
RP   1-942
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   ;
RL   Submitted (05-JUN-1997) to the EMBL/GenBank/DDBJ databases.
RL   Centre for Molecular Biotechnology, Queensland University of Technology,
RL   George Street, Brisbane, Qld 4001, Australia
XX
DR   SPTREMBL; O70904; O70904.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .942
FT                   /chromosome="III"
FT                   /db_xref="taxon:12224"
FT                   /organism="sugarcane mosaic virus"
FT                   /isolate="Isis 3"
FT   CDS             <1. .942
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O70904"
FT                   /product="coat protein"
FT                   /protein_id="AAC17475.1"
FT                   /translation="AGTVDAGAQGEGGNAGTQPPATGAAAQGGAQPPATGAAAQPPTTQ
FT                   GSQPPTGGATGGGGAQTGAGETGSVTGGQRDKDVDAGTTGKITVPKLKAMSKKMRLPKA
FT                   KGKDVLHLDFLLTYKPQQQDISNTRATREEFDRWYEAIKKEYEIDDTQMTVVMSGLMVW
FT                   CIENGCSPNINGSWTMMDGDEQRVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNST
FT                   ERYMPRYGLQRNLTDYSLARYAFDFYEMNSRTPARAKEAHMQMKAAAVRGSNTRLFGLD
FT                   GNVGETQENTERHTAGDVSRNMHSLLGVQQHH"
XX
SQ   Sequence 942 BP; 313 A; 207 C; 244 G; 178 T; 0 other;

AF006728  Length: 942  December 21, 2001 14:43  Type: N  Check: 9123  ..

       1  gctggaactg tcgatgcagg cgctcaagga gaaggtggaa acgccggaac
      51  tcagccgcca gccactggag cagcagctca aggaggagct caaccaccag
     101  caactggagc agccgcgcaa ccacctacga ctcaaggttc acaaccgccc
     151  acagggggag ctactggtgg aggtggtgca caaacaggag ctggtgaaac
     201  tggctcagtt acaggaggcc agagagacaa ggatgtagat gctggtacga
     251  caggcaaaat cacagtgcca aaacttaaag ccatgtcgaa gaagatgcgc
     301  ttgccaaaag caaaaggaaa agatgttttg catctggatt ttctgttaac
     351  atacaaaccg caacaacaag acatatcaaa cacaagagca accagagagg
     401  agtttgatag gtggtatgaa gccataaaga aggaatatga aatagatgac
     451  acacaaatga cagttgtcat gagtggtcta atggtatggt gtattgagaa
     501  tggttgctca ccaaacataa acggaagttg gacaatgatg gatggagatg
     551  aacaaagagt cttcccatta aaaccagtta ttgaaaatgc atctccaaca
     601  ttccggcaaa taatgcatca tttcagtgat gcagctgaag catatatcga
     651  atatagaaac tctacagagc gatacatgcc acgatatgga cttcagcgaa
     701  atctcaccga ctatagctta gcgcggtatg cctttgactt ttacgaaatg
     751  aattcaagga caccagctag agctaaggaa gcccacatgc agatgaaggc
     801  cgcagcagtc cgtggttcaa acacacgatt gttcggtctg gacggaaatg
     851  tcggcgagac ccaggagaat acagagagac acacagctgg cgatgtcagt
     901  cgcaacatgc actctctgtt gggagtgcag cagcaccact ag