Sequence of DPV Sugarcane mosaic virus

Sugarcane mosaic virus coat protein gene, partial cds.

ACC No: AF006736

Dated: 1998-05-29 | Length: 918 | CRC: 49785077

                !!NA_SEQUENCE 1.0
ID   AF006736   standard; RNA; VRL; 918 BP.
XX
AC   AF006736;
XX
SV   AF006736.1
XX
DT   29-MAY-1998 (Rel. 55, Created)
DT   29-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus coat protein gene, partial cds.
XX
KW   .
XX
OS   sugarcane mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-918
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the coat protein coding region of twelve sugarcane
RT   mosaic potyvirus isolates from Australia, USA and South Africa";
RL   Unpublished.
XX
RN   [2]
RP   1-918
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   ;
RL   Submitted (05-JUN-1997) to the EMBL/GenBank/DDBJ databases.
RL   Centre for Molecular Biotechnology, Queensland University of Technology,
RL   George Street, Brisbane, Qld 4001, Australia
XX
DR   SPTREMBL; O92655; O92655.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .918
FT                   /chromosome="III"
FT                   /db_xref="taxon:12224"
FT                   /organism="sugarcane mosaic virus"
FT                   /isolate="usla"
FT   CDS             <1. .918
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O92655"
FT                   /product="coat protein"
FT                   /protein_id="AAC17483.1"
FT                   /translation="AGTVDAGAQGGGGNVGTQPPATGAAAQGGAQPPATGAAAQPPATQ
FT                   GSQPPTGGATGGGGAQVTGGQRDKDVDAGTTGKITVPKLKAMSKKMRLPKAKGKDVLHL
FT                   DFLLTYKPQQQDISNTRATREEFDRWYEAIKKEYEIDDTQMTVVMSGLMVWCIENGCSP
FT                   NINGSWTMMDGDEQRVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYG
FT                   LQRNLTDYSLARYAFDFYEMNSRTPARAKEAHMQMKAAAVRGSNTRLFGLDGNVGETQE
FT                   NTERHTAGDVSRNMHSLLGVQQHH"
XX
SQ   Sequence 918 BP; 304 A; 200 C; 239 G; 175 T; 0 other;

AF006736  Length: 918  December 21, 2001 14:43  Type: N  Check: 9041  ..

       1  gctggaactg tcgatgcagg cgctcaagga ggaggtggaa acgtcggaac
      51  tcagccgcca gccactggag cagcagctca aggaggagct caaccaccag
     101  caactggagc ggctgcgcaa ccacctgcga ctcaaggttc acaaccaccc
     151  acagggggag ctactggtgg aggtggtgca caagttacag gaggccaaag
     201  agacaaggat gtagatgctg gtacgacagg taaaatcaca gtgccaaaac
     251  ttaaagccat gtcgaagaag atgcgcttgc caaaggcaaa aggaaaggat
     301  gttttgcatc tggactttct gttaacatac aaaccgcaac aacaagacat
     351  atcaaacaca agagcaacca gagaggagtt tgataggtgg tatgaagcca
     401  taaagaagga atatgaaata gatgacacac aaatgacagt cgtcatgagt
     451  ggtctaatgg tatggtgtat tgagaatggt tgctcaccaa acataaacgg
     501  aagttggaca atgatggatg gagatgaaca aagagtcttc ccattaaaac
     551  cagttattga aaacgcatct ccaacattcc ggcaaataat gcatcatttt
     601  agtgatgcag ctgaagcata tatcgagtat agaaactcta cagagcgata
     651  catgccacga tacggacttc agcgaaatct caccgactat agcttagcgc
     701  ggtatgcatt tgacttttac gaaatgaatt caaggacacc agctagagct
     751  aaagaagccc acatgcagat gaaggccgca gcagtccgtg gttcaaacac
     801  acgattgttc ggtctggacg gaaatgtcgg cgagactcag gagaatacag
     851  agagacacac agctggcgat gtcagtcgca acatgcactc tctgttggga
     901  gtgcagcagc accactag