Sequence of DPV Sugarcane mosaic virus

Sugarcane mosaic virus coat protein gene, partial cds.

ACC No: AF006737

Dated: 1998-05-29 | Length: 942 | CRC: -122730611

                !!NA_SEQUENCE 1.0
ID   AF006737   standard; RNA; VRL; 942 BP.
XX
AC   AF006737;
XX
SV   AF006737.1
XX
DT   29-MAY-1998 (Rel. 55, Created)
DT   29-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus coat protein gene, partial cds.
XX
KW   .
XX
OS   sugarcane mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-942
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the coat protein coding region of twelve sugarcane
RT   mosaic potyvirus isolates from Australia, USA and South Africa";
RL   Unpublished.
XX
RN   [2]
RP   1-942
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   ;
RL   Submitted (05-JUN-1997) to the EMBL/GenBank/DDBJ databases.
RL   Centre for Molecular Biotechnology, Queensland University of Technology,
RL   George Street, Brisbane, Qld 4001, Australia
XX
DR   SPTREMBL; O70912; O70912.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .942
FT                   /chromosome="III"
FT                   /db_xref="taxon:12224"
FT                   /organism="sugarcane mosaic virus"
FT                   /isolate="usfl"
FT   CDS             <1. .942
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O70912"
FT                   /product="coat protein"
FT                   /protein_id="AAC17484.1"
FT                   /translation="AGTVDAGVQGESGNAGTQPPATGAAAQGGAQPPATGAAAQPPATQ
FT                   GSQPPTGGATGGGGAQTGAGGTGSVTGGQRDKDVDAGTTGKITVPKLKAMSKKMRLPKA
FT                   KGKDVLHLDFLLTYKPQQQDISHTRATREEFDRWYEAIKKEYEIDDTQMTVVMSGLMVW
FT                   CIENGCSPNINGSWTMMDGDEQRVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNST
FT                   ERYMPRYGLQRNLTDYSLARYAFDFYEMNSRTPARAKEAHMQMKAAAVRGSNTRLFGLD
FT                   GNVGETQENTERHTAGDVSRNMHSLLGVQQHH"
XX
SQ   Sequence 942 BP; 312 A; 212 C; 244 G; 174 T; 0 other;

AF006737  Length: 942  December 21, 2001 14:43  Type: N  Check: 7557  ..

       1  gctggaactg tcgatgcagg cgttcaagga gaaagtggaa acgccggaac
      51  tcagccgcca gccactggag cagcagctca aggaggagct caaccaccag
     101  caactggagc agctgcacaa ccacccgcga ctcaaggttc acaaccgccc
     151  acagggggag ctactggtgg aggtggtgca caaacaggag ctggcggaac
     201  tggctcagtt acaggaggcc agagagacaa ggatgtcgat gctggcacga
     251  caggcaaaat cacagtacca aaacttaaag ccatgtcgaa gaagatgcgc
     301  ttgccaaaag caaaaggaaa agatgtttta catctggact ttctgttaac
     351  atacaagccg caacaacaag acatatcaca cacaagagca accagagagg
     401  agtttgatag gtggtatgaa gccataaaga aggaatatga aatagatgac
     451  acacaaatga cagttgtcat gagtggtcta atggtatggt gtatcgagaa
     501  tggttgctca ccaaacataa acggaagttg gacaatgatg gatggggatg
     551  aacaaagagt cttcccatta aaaccagtta ttgaaaacgc atctccaaca
     601  ttccggcaaa taatgcatca tttcagtgat gcagctgaag catatatcga
     651  atatagaaac tctacagagc ggtacatgcc acgatacgga cttcagcgaa
     701  atctcaccga ctatagctta gcacggtatg catttgactt ttacgaaatg
     751  aattcaagga caccagctag agctaaggaa gcccacatgc agatgaaggc
     801  cgcagcagtc cgtggttcaa acacacgatt gttcggtctg gacggaaatg
     851  tcggcgagac tcaggagaat acagagagac acacagctgg cgatgtcagt
     901  cgcaacatgc actctctgtt gggagtgcag cagcaccact ag