Sequence of DPV Ceratobium mosaic virus
Ceratobium mosaic potyvirus strain CerMV-6 polyprotein (NIb/CP) gene, partial cds.
ACC No: AF022444
Dated: 2000-08-04 | Length: 1557 | CRC: 1931654990
!!NA_SEQUENCE 1.0
ID AF022444 standard; DNA; VRL; 1557 BP.
XX
AC AF022444;
XX
SV AF022444.1
XX
DT 31-OCT-1997 (Rel. 53, Created)
DT 04-AUG-2000 (Rel. 64, Last updated, Version 5)
XX
DE Ceratobium mosaic potyvirus strain CerMV-6 polyprotein (NIb/CP) gene,
DE partial cds.
XX
KW .
XX
OS Ceratobium mosaic potyvirus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1557
RX MEDLINE; 98309067.
RA Mackenzie A.M., Nolan M., Wei K.J., Clements M.A., Gowanlock D.,
RA Wallace B.J., Gibbs A.J.;
RT "Ceratobium mosaic potyvirus: another virus from orchids";
RL Arch. Virol. 143(5):903-914(1998).
XX
RN [2]
RP 1-1557
RA Gibbs A., Mackenzie A., Blanchfield A., Cross P., Wilson C., Kitajima E.,
RA Nightingale M., Clements M.;
RT "Viruses of orchids in Australia: their identification, biology and
RT control";
RL Aust. Orchid Rev. 65(3):10-21(2000).
XX
RN [3]
RP 1-1557
RA Mackenzie A.M., Nolan M., Wei K.-J., Gibbs A.J.;
RT ;
RL Submitted (03-SEP-1997) to the EMBL/GenBank/DDBJ databases.
RL Research School of Biological Sciences, Australian National University,
RL Biology Place, Acton, Canberra, ACT 2601, Australia
XX
DR SPTREMBL; O37933; O37933.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1557
FT /db_xref="taxon:66702"
FT /note="isolated from Dendrobium 'Pauline'= D.phalaenopsis
FT var. schroederianum x D.undulatum (Orchidaceae)"
FT /organism="Ceratobium mosaic potyvirus"
FT /strain="CerMV-6"
FT CDS <1. .1467
FT /codon_start=1
FT /db_xref="SPTREMBL:O37933"
FT /gene="NIb/CP"
FT /product="polyprotein"
FT /protein_id="AAC59612.1"
FT /translation="GNNSGQPSTVVDNTLMVVIAIYYSCKKQGWTDDDIQKRLVFFANG
FT DDIILAVQTHDEWLYDKLSSSFSELGLNYDFTERTTERKNLWFMSHTAIEVDGMYIPKL
FT EPERIVSILEWDRSRELMHRMEAICAAMIEAWGYTDLLDEIRKFYLWLVRKDEISELAL
FT IGKAPYIAETALKKLYTNKDADEQELQRYLDVLNINCVEDCGEFVSLQSLIKPGEGGPE
FT SLDAGDGSKKKEKERPTDQSQQEMVTPNRDKDVNVGSKGKVIPRLKKITKKMNLPTVKG
FT NVILNLDHLIEYKPEQTDLFNTRATKSQFDAWYEAVKKEYELDDGQMGYVMNGFMVWCI
FT DNGTSPDITGSWVMMDGDEQVEYPLKPMIENAKPTLRQVMHHFSDAAEAYIEMRNSDGL
FT YMPRYGLLRNLRDRSLARYAFDFYEVNSKTSDRAREAVAQMKAAALSNVRTRMFGLDGN
FT VATNMEDTERHTARDVNRNMHSLLGMEPMQ"
FT mat_peptide <1. .633
FT /gene="NIb"
FT /product="NIb polymerase"
FT mat_peptide 634. .1464
FT /gene="CP"
FT /product="coat protein"
FT 3'UTR 1468. .>1557
FT /gene="CP"
XX
SQ Sequence 1557 BP; 502 A; 256 C; 395 G; 404 T; 0 other;
AF022444 Length: 1557 December 21, 2001 14:44 Type: N Check: 8281 ..
1 gggaacaaca gcgggcagcc gtcaacagtc gtggacaaca cacttatggt
51 cgtcattgca atttactact cgtgtaagaa acaaggatgg acagatgatg
101 acatacagaa gcgattagtt ttctttgcaa atggcgacga tattatatta
151 gctgtacaaa cacacgatga atggttgtat gacaagctta gctcatcttt
201 ttctgagcta gggcttaatt acgactttac agagagaact acagagagga
251 agaatttgtg gttcatgtct cacacagcta ttgaagttga cggtatgtat
301 atccctaaac ttgagccaga acgtatagtg tctattttgg aatgggatag
351 aagccgtgag ttgatgcatc gcatggaggc tatttgtgca gcaatgatag
401 aggcatgggg atacaccgac ctattggatg aaattcggaa attttattta
451 tggttggttc ggaaggatga aatcagcgag ctggcgttga taggtaaagc
501 accatacata gctgaaacag cactcaagaa attgtacacc aataaggatg
551 ctgatgagca ggagctgcag agatacctag acgtcttgaa tataaactgc
601 gtagaagatt gtggggaatt tgtttcactt caatctttga tcaagccagg
651 agaaggtggg cctgagagtt tagatgctgg agatggaagt aagaagaagg
701 agaaggagag accgactgat cagtcacaac aagagatggt cactcctaac
751 agggataagg atgtcaatgt cggatcaaaa ggaaaggtta tcccaagact
801 gaagaaaatc acaaagaaga tgaatctacc cacagtgaaa ggaaatgtca
851 tactcaattt ggatcatttg attgaataca aacctgaaca aacagactta
901 ttcaacacac gtgcaacaaa atcacaattt gatgcttggt atgaggctgt
951 taaaaaggag tatgaactgg atgatgggca gatgggttat gtgatgaatg
1001 gatttatggt ttggtgcatt gacaatggaa catcacctga catcactgga
1051 tcatgggtca tgatggacgg agatgagcaa gtggagtacc cactgaaacc
1101 aatgattgaa aatgctaagc cgacactgcg acaagtgatg catcattttt
1151 cagatgcggc tgaagcatac atagagatga ggaattctga cggactatac
1201 atgcctaggt atggtctgct tcggaatttg agagacagga gcctagcacg
1251 atacgctttt gatttttatg aagttaattc taaaacatca gatcgtgcaa
1301 gagaagctgt tgcacagatg aaggctgccg ctctaagtaa tgttagaaca
1351 aggatgtttg gccttgatgg taatgttgct acaaatatgg aggatactga
1401 gaggcacact gcaagggatg taaatagaaa catgcactca cttcttggaa
1451 tggaaccaat gcagtaaagg ataggtaaac tgtccacagt tatcacctct
1501 agtcgcttat gattatgtcg tagatactat tatgtgtgtt ttgtttcagt
1551 gtggtct