Sequence of DPV Capsicum chlorosis virus
Gloxinia tospovirus M RNA non-structural protein and G1/G2 glycoproteins genes, complete cds.
ACC No: AF023172
Dated: 1998-05-05 | Length: 4780 | CRC: -2110027193
!!NA_SEQUENCE 1.0
ID AF023172 standard; RNA; VRL; 4780 BP.
XX
AC AF023172;
XX
SV AF023172.1
XX
DT 16-OCT-1997 (Rel. 52, Created)
DT 05-MAY-1998 (Rel. 55, Last updated, Version 2)
XX
DE Gloxinia tospovirus M RNA non-structural protein and G1/G2 glycoproteins
DE genes, complete cds.
XX
KW .
XX
OS Gloxinia tospovirus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN [1]
RP 1-4780
RA Ueng P.P., Hsu H.-T., Subramaniam K., Ye Z.;
RT "The nucleotide sequence of M RNA of HT-1 variant of Gloxinia tospovirus";
RL Unpublished.
XX
RN [2]
RP 1-4780
RA Ueng P.P., Hsu H.-T., Subramaniam K., Ye Z.;
RT ;
RL Submitted (07-SEP-1997) to the EMBL/GenBank/DDBJ databases.
RL Molecular Plant Pathology Laboratory, Beltsville Agricultural Research
RL Center, 10300 Baltimore Avenue, Beltsville, MD 20705, USA
XX
DR SPTREMBL; O37938; O37938.
DR SPTREMBL; O37939; O37939.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4780
FT /chromosome="M RNA"
FT /db_xref="taxon:76146"
FT /organism="Gloxinia tospovirus"
FT /strain="HT-1"
FT CDS 30. .956
FT /codon_start=1
FT /db_xref="SPTREMBL:O37938"
FT /product="non-structural protein"
FT /protein_id="AAC15465.1"
FT /translation="MSRFSNVLDSFRLQNNSSKELVPAVKTENSRSLLARNVSQKDVDS
FT ALLNKAKTINGKQYVSGGDSSVLGTYSNELAVEATSDDILSRLVVEQSTHLSNWKNDSL
FT VGNGNDKVSFTINIMPTWNSGRRFMHISRLIVWVVPTIFNSTNNVKATLVDQNKMTKSE
FT KIVISRQASLKDPMCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASVMYSWV
FT KNFCDTPIATESTTCDVVPINRAKVIRSAALIEACKLMIPKGTGGKQISNQIKNLQKVA
FT EKLALEAENEEENDDVDIEMDNLLEIS"
FT CDS complement(1392. .4760)
FT /codon_start=1
FT /db_xref="SPTREMBL:O37939"
FT /product="G1/G2 glycoproteins"
FT /protein_id="AAC15466.1"
FT /translation="MKKYYLLVYCLGLLSLFFVSEVYLLNQADNSVQLRKIQDRYKVDD
FT PEDLIDVEQPVIVKTEEPKGKKLSRILRNDETTTNLPSPELSCDSFEKKYCVIKGVSDF
FT NAHYQIDSGEGIISCISSFSNIFEICQYDKEFKKIKFKNFPVVPVLKLENKKILEIGTK
FT FFFVDKSNNPISIDPKVDLKSPTVARLSVRLSGDCKINQVSMSSPYQIKLRSEENIGLL
FT IKNIKSSKLENVKSIIGDSTINFKPEELDGNHFLLCGDKSSLIAKVDIPVRNCVSKYSD
FT EPKKIFFCTNFSYFKWVFVFLMIAFPISWFIWKTKDALSLWYDILGILTYPALWTINWL
FT WPYFPLKCRVCGCFSFLTHSCTEKCVCNQSKASKDHAEECYLSIKDKVEWHKLTLIQQF
FT QFIINTKLSTNFLVFITKMILASILISYIPASIAMKQQNLCVEKCYYNLNLDNLTTDKF
FT GMPSNGYESCDCSIGNVITETVYRSGVPMSRATSLNDCVLGSDLCMVRNNQAHNLFACR
FT NGCNSLESIKSIPNVKFNKLYRGPSFKGNLTSLKIANRLREGYMDSTTESIILEEESAK
FT EYKFYKKLKVDDVPPENLMPRQSLVFSTEVDGKYRYLIEMDIKSNTGSIYLLNDDATHS
FT PMEFMVYVKSVGVEYDIRYKYSTAKIDTTVADYLVTCTGACNDCIKQKPKVGVLDFCVT
FT PTSWWGCEELGCLAINEGGICGHCTNIYDLSSLVNIYQVVESHVSAEICVKSLDGYSCK
FT KHSDRSPIQTDYYQLDMSVDLHNDYMSTDKLFAVDKQQRILTGNIADLGDFAGTSFGHP
FT QITADGVTLYLYLLLYHQMILLWSCSAVGEKKVNIRQCGLYTYNSIYVLSISKDVSHID
FT EYNNKLYMVKDFLVGKLKMVIDMPKEMFKKIPTKPIISEAKMICSGCSQCTAGIDCNIT
FT YTSDTTFSSRLMMDTCSFKSDQLGTFLGPNKKSIKAYCSEEIADKSLKLIPEDQDELTM
FT DIPVDEFIHIDQDTIIHFDDKSAHDENIHHSDTTISSLWDWIKAPFNWVASFFGNFFDL
FT VRIVLVIAAACIGIYIVSSIFRLSKTYYVNKRRQNLEDAMESMESSVLLTNYTGIDQAR
FT KRRSPPKGYDFSLDI"
XX
SQ Sequence 4780 BP; 1606 A; 812 C; 759 G; 1603 T; 0 other;
AF023172 Length: 4780 December 21, 2001 14:44 Type: N Check: 1463 ..
1 aaaaatcatt gaaatatcat caagaaataa tgtctcgctt ttctaatgtt
51 ttggattcct tccgtcttca aaataattca agcaaagaat tagtccctgc
101 agtcaaaaca gaaaacagta ggagtctctt agctagaaat gtttctcaaa
151 aagatgttga cagtgcttta ctaaacaaag caaaaacaat aaatgggaaa
201 cagtatgttt ctggaggaga ctctagcgta ctaggcacgt attctaatga
251 attagctgtg gaagctactt cagatgatat cctgtctaga cttgttgttg
301 aacaaagcac ccatctgagc aattggaaga atgattctct agttggcaat
351 ggaaatgata aggttagttt tactataaat ataatgccta catggaacag
401 tggaaggagg tttatgcaca tatccagact catagtttgg gttgttccaa
451 ctattttcaa ttcaacaaat aatgttaaag ctactttagt tgatcaaaac
501 aagatgacca aatctgagaa aatagttata agcaggcaag cttctttgaa
551 agatcctatg tgttttattt tccatttaaa ctggtctttc cctaaagaaa
601 ggaacactcc taaacagtgc atgcagctca atttaacaag tgatgaaaag
651 tatgctaaag gggttagctt tgcatcagta atgtattcat gggtgaagaa
701 cttctgtgat actcctattg ctacagagag taccacatgt gatgttgtac
751 caataaacag agccaaagtg atccgatctg ctgccttaat tgaagcgtgt
801 aaattaatga tacctaaagg aactggagga aaacaaatat ccaatcaaat
851 taaaaacttg caaaaagttg cagaaaaact agcattggaa gcagaaaatg
901 aagaagagaa tgatgatgtt gatatagaaa tggacaattt acttgagatt
951 tcatgagtat tatcaacaat atatatattt gagtaagtaa aatcaaatat
1001 taatttatta atttgtgttt gcataagtca actttagtaa aagtaaacaa
1051 aaacaaaaac aaataaataa ataaaataga ataaataaaa taaaataaaa
1101 taagtaaaat aaaagtactt gtgtgtttta aatttatcgt gttttaagta
1151 gatatttgca tgtacaataa atagataaaa taaaagaaaa gaaaagaaaa
1201 aacgaacaaa aattatctta tattatataa taaataaggc ttaggccaag
1251 tgttggcttt tcaccccttt ttttggattt ttgatttatt ttgtattttt
1301 tatatcttat tttatttatt tatttatttt gtttatctgt ttatttccta
1351 cttgttttat aaacacctat ttgaaactga atagatacag cttagatatc
1401 taatgagaaa tcataaccct ttggaggaga tctccttttt ctagcctgat
1451 caattcctgt ataatttgtc aaaagaacac tagattccat agactccata
1501 gcatcctcta agttttgtct cctcttgttg acataatatg tcttagacaa
1551 tctaaatatg ctacttacaa tgtaaatacc tatgcatgca gctgctataa
1601 ctagaactat cctaactagg tcaaaaaagt tcccaaagaa ggaggctacc
1651 cagttgaaag gtgcttttat ccaatcccat aagctagata tagtagtgtc
1701 agaatgatgt atgttctcat catgtgcact tttatcatca aaatgtatga
1751 tagtatcttg atcaatatga atgaattcat cgactggaat atccattgta
1801 agctcatctt gatcttcagg aattaacttc aaagatttgt ctgcaatctc
1851 ttctgagcaa taagctttta tggatttttt gttaggacct aaaaatgtgc
1901 ctaattgatc ggatttaaag gaacaagtat ccatcattaa tcttgatgag
1951 aaggttgtat ccgaagtata ggttatattg caatcaatac ctgcagtaca
2001 ttgagaacaa ccagaacaga tcattttagc ttctgaaata ataggctttg
2051 tagggatctt tttgaacatt tctttaggca tgtctataac cattttaagc
2101 ttacctacta aaaaatcctt taccatgtaa agcttgttgt tatattcatc
2151 tatgtgagac acatcttttg atatggataa gacataaata ctattatacg
2201 tgtacaatcc acattgtctg atattgactt tcttttctcc cacagcactg
2251 cagctccaaa gtaaaatcat ttggtgataa agtagcaggt atagataaag
2301 ggtaacccca tctgctgtaa tctgagggtg cccaaatgat gttcctgcaa
2351 aatcccccag atcagctata ttcccagtga gaattctttg ctgcttgtct
2401 actgcaaata gcttgtcagt gctcatataa tcattgtgca aatccactga
2451 catatcaagc tgataataat cagtttggat aggagatcta tcagaatgtt
2501 ttttacaaga atacccatct aatgatttca cacaaatctc tgctgacaca
2551 tgactttcaa caacttgata tatattgacc aaacttgata gatcatatat
2601 gtttgtgcaa tgtccacaaa tacctccttc atttattgcc agacatccta
2651 attcttcgca accccaccaa gaagttggtg taacacaaaa gtctagaacc
2701 cccaccttag gtttttgctt tatgcagtca ttgcaagcac ctgtgcatgt
2751 taccaagtaa tctgctacag ttgtatctat ttttgcagtt gaatatttat
2801 atcttatatc atactcaaca cctacacttt ttacatagac cataaattcc
2851 ataggagaat gagtagcatc atcattgagc aaatagattg aacctgtatt
2901 tgatttgatg tccatttcta ttaaatatct atactttcca tcaacctctg
2951 ttgaaaatac caaagattgt ctaggcatta gattctctgg aggtacatca
3001 tccactttta gctttttata aaatttatat tctttagcag actcttcttc
3051 caaaattatt gattctgtgg tgctgtccat atatccttct ctcaatctat
3101 ttgctatttt taaactagtt aagttgcctt taaaagatgg acctctgtaa
3151 agcttattga acttgacgtt tggtatgctt ttgatagatt caagagaatt
3201 acaaccattc ctacaagcaa ataaattgtg agcttgatta ttccttacca
3251 tgcagagatc tgacccaagc acacaatcat taagggatgt tgctctagac
3301 atgggaactc cagatcgata tactgtttca gttataacat tccctatgga
3351 acaatcacag gactcatacc cgttggatgg cattccaaac ttatcagttg
3401 tcagattatc caaatttaaa ttataataac atttctcaac acataagttc
3451 tgttgtttca tagcaatact cgccggtata tatgagatga gaattgatgc
3501 caatatcatt tttgtaataa aaactaaaaa gttagtgctt aatttcgtgt
3551 taattataaa ttgaaattgt tggattagag ttagcttatg ccattcaact
3601 ttgtccttta tgctaagata acattcctca gcatgatctt tagaagcctt
3651 gctctggtta caaacacatt tttctgtgca agagtgagtt aagaatgaaa
3701 aacatccaca aactctacat tttaaaggga aatatggcca taaccaatta
3751 atagtccaaa gagcagggta tgttaaaatg ccaaggatat cataccagag
3801 actcaatgca tctttggttt tccaaatgaa ccatgatata gggaaagcaa
3851 tcataagaaa cacaaaaacc catttaaagt aagaaaaatt tgtgcagaag
3901 aaaattttct ttggttcatc tgaatatttt gaaacacagt tccttactgg
3951 tatatctacc ttagcaatta agctagattt atcaccacaa agtagaaaat
4001 ggttaccatc gagttcttca ggcttaaaat tgattgtaga atctccaata
4051 attgatttga cattctctag tttagagctt tttatatttt ttatcaaaag
4101 tccaatattc tcctcagatc ttagtttaat ttgataggga gatgacattg
4151 atacttgatt tatcttgcaa tcacctgaca gtctaacaga aagtcttgca
4201 actgtaggag attttaggtc tacttttgga tcaatgctta tagggttgtt
4251 cgatttgtca acaaagaaga attttgttcc aatttcaagg atttttttgt
4301 tctctaattt caggacagga accactggga aatttttgaa ttttatcttt
4351 ttgaactctt tatcatattg gcaaatctca aatatatttg aaaaactgct
4401 tatgcatgaa attattccct caccactgtc aatttgatag tgtgcattaa
4451 aatcgcttac acctttaatg acacagtact tcttttcaaa actgtcacaa
4501 ctcaattctg gcgatggtag atttgttgtt gtttcatcat ttctcaaaat
4551 tctggaaagc tttttcccct taggttcttc agttttgaca ataacaggct
4601 gttctacatc aataaggtct tctggatcat ctactttgta cctatcttgt
4651 atctttctca actggacact gttgtctgct tggttcaaga ggtagacctc
4701 agacacgaag aagagcgaaa gtaaacctag acagtagaca agtagatagt
4751 atttcttcat ctttataagg taattcaaga