Sequence of DPV African horse sickness virus
African horse sickness virus serotype 9 major outer capsid protein VP2 gene, complete cds.
ACC No: AF043926
Dated: 2000-04-30 | Length: 3205 | CRC: 1794340688
!!NA_SEQUENCE 1.0
ID AF043926 standard; RNA; VRL; 3205 BP.
XX
AC AF043926;
XX
SV AF043926.1
XX
DT 01-JUN-1999 (Rel. 59, Created)
DT 30-APR-2000 (Rel. 63, Last updated, Version 4)
XX
DE African horse sickness virus serotype 9 major outer capsid protein VP2
DE gene, complete cds.
XX
KW .
XX
OS African horse sickness virus
OC Viruses; dsRNA viruses; Reoviridae; Orbivirus;
OC African horse sickness group.
XX
RN [1]
RP 1-3205
RX MEDLINE; 20179954.
RA Venter M., Napier G., Huismans H.;
RT "Cloning, sequencing and expression of the gene that encodes the major
RT neutralisation-specific antigen of African horsesickness virus serotype 9";
RL J. Virol. Methods 86(1):41-53(2000).
XX
RN [2]
RP 1-3205
RA Venter M.;
RT ;
RL Submitted (21-JAN-1998) to the EMBL/GenBank/DDBJ databases.
RL Genetics, University of Pretoria, Lynnwood Road, Pretoria, Gauteng 0002,
RL South Africa
XX
DR SPTREMBL; Q9WSQ2; Q9WSQ2.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3205
FT /chromosome="L2"
FT /db_xref="taxon:10896"
FT /organism="African horse sickness virus"
FT /serotype="9"
FT CDS 13. .3174
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WSQ2"
FT /note="serotype specific antigen; VP2 contains serotype
FT specific epitopes and neutralisation epitopes"
FT /product="major outer capsid protein VP2"
FT /protein_id="AAD33082.1"
FT /translation="MAFEFGILQTDKIRENTLEKTNCDVILTRENRVRTREVDGVKGYY
FT WEDTDHRLGLCEVEHTVSVRDFMYKQTKCEGSYPVVPLYMIDAIKYGRMIDRNDLQIRV
FT DKDDKTLFKIQVQPYLGDAYFSPEHYTATFFKREPLPIHVDTIRDYIGKRINYFERELG
FT SGVRDANLEMIVGKWKDNTYKRIEGEKTTMCVRHEPDSVLQILKKMRFGMLYPNYYMLN
FT TGYIVTESSKGAPLNRWLVKERTVGKVKAAEAFAGNSLLKNLASRMEDEELSREIIVAV
FT INYGSKFGTRSGKKKDLMTIDKLEKYCESLTTFVHKKKRDEGDDETARAIIRNQWIKGM
FT PSMNLKKEMKVSRGPIQNWSFFMSLEVFKRNNKVDIDPNHDTWKNHVKEIRERMQKEQS
FT ANSNLPLKDPKLMASAYLQVNSTRTVEHWIDWVVDLIMLAQVKRLIKEYKFIRLETTSL
FT MAGMNKLVGALRCYAYCLILALYDFYGADIEGFEKGSNSSAIVETVVQMFPNFKQEIQA
FT NFGINLNIKDKKQVLFVRMDMGSEFSEDEQKGYMFEYGWAKREERIWTNYGDILTDLVE
FT QLYKSILDHEEWEKIVDDPERYFYDELFNASPETVFISKGYDLDNNIVIEGKVGQDVTY
FT FSKRFVSYWYRVRQVQTSKGIERRSIEDVKYREFDIESFKPYAIGEIGIHASTYKYQDL
FT LAGRNRGEKVKDSQALVWYDLALTNYTLVRPQDRCWIMSCTDSEYTLRFAMITMIFERL
FT SEETDLSYHDILLRVREYPIQSFASYKHFYVRVLQHVFRDYQEIDVLEFCTRMLDPRTR
FT ESGLNKFSRFKQWRESEFLIDALKMNFLLWVVFELENIDVDYSKKRHPLLISTDKGLRV
FT VPVDLFNSMLSVSSSGWIPYVERVCERSEIKRRLNADELKLKNWFIAYYITLPLLRRAE
FT PRMSFKYEGITTWIGSNCGGVRDYLIQMLPARKPKPGVLILAYGAETNVAWLNHALRDI
FT LSLEGSLGMIIISDGSVVNKSKLRVRDMKIYNRGEVDRLILISSGDYTFGNKYLLSKLM
FT AKIEQ"
XX
SQ Sequence 3205 BP; 1020 A; 465 C; 809 G; 911 T; 0 other;
AF043926 Length: 3205 December 21, 2001 14:50 Type: N Check: 5405 ..
1 gtttaattca ccatggcgtt cgagtttgga atacttcaga cagataaaat
51 tagagagaat acacttgaaa agacaaactg tgacgtgatt cttacgagag
101 agaatagagt gcgaacgagg gaagttgatg gagtgaaagg atattactgg
151 gaagataccg atcacaggtt gggcttatgt gaagtcgaac atactgtgtc
201 ggtgagggat tttatgtaca aacaaacgaa atgtgaaggg tcatatccgg
251 tcgtgccttt atatatgatt gatgcaatta aatatggacg aatgatcgat
301 aggaatgacc tccaaattag agtagacaaa gatgataaaa ctctatttaa
351 gatacaagtg cagccgtact taggtgatgc ctatttttca ccagagcatt
401 acaccgcgac cttctttaaa agagaaccgc tgcctattca tgtagatacg
451 attcgagatt acattggaaa acggattaat tatttcgagc gagagttagg
501 tagtggagta cgagatgcga acttagaaat gatcgttggg aagtggaagg
551 ataataccta taaaagaatt gaaggtgaaa aaacgacgat gtgcgtgagg
601 catgaaccag attcggtact acagatatta aaaaagatga ggtttggaat
651 gttatatcca aattattata tgttgaatac aggttatata gttactgaat
701 caagtaaggg ggcaccgttg aatcgatggt tggtgaaaga gagaacagtt
751 ggaaaagtca aggcggccga ggcctttgcg ggcaattcgt tattaaaaaa
801 cttggcaagc cggatggaag acgaagaatt gagtcgggaa ataatagttg
851 cggtgatcaa ttatggttcg aagttcggga ctaggtccgg gaagaaaaaa
901 gatttgatga ccattgataa gcttgaaaaa tactgtgaat ccttaacgac
951 gtttgttcac aaaaagaagc gtgatgaagg tgatgatgaa acagctaggg
1001 ctatcattag gaatcaatgg attaagggaa tgccaagcat gaatttgaaa
1051 aaagaaatga aagtttcgcg tggtcctatt caaaattggt cgttttttat
1101 gtcccttgag gtgtttaaac gtaataataa agttgatatt gatccaaatc
1151 atgatacatg gaaaaaccat gtcaaagaaa tcagagagag gatgcagaaa
1201 gaacagagcg cgaattccaa cttacccctt aaagatccca agttgatggc
1251 gtcagcttat ctacaagtga attctacgcg cacggtcgaa cattggatag
1301 attgggttgt tgatttaatt atgttagcac aggttaaacg attaattaag
1351 gagtacaagt ttataagatt agagactacg agcttaatgg caggaatgaa
1401 taaactagtc ggagctttac gttgctatgc ctattgcttg attctggctc
1451 tctatgattt ctatggtgcg gatatcgaag gttttgaaaa gggttcaaac
1501 tcttccgcga tagtagagac ggttgtacag atgttcccga acttcaagca
1551 ggagattcaa gctaatttcg gtataaattt aaatatcaaa gataagaagc
1601 aagtgttgtt cgtcaggatg gatatgggtt ctgagtttag tgaggatgag
1651 cagaaaggat atatgtttga gtacggatgg gcgaaaaggg aagagcgaat
1701 atggacgaat tacggtgaca tattaactga tttggtcgaa cagctttata
1751 agagcatttt ggatcatgag gaatgggaga aaatcgttga tgatcctgag
1801 aggtatttct atgatgagct ttttaacgca tcaccagaga cagtttttat
1851 tagcaaaggt tatgaccttg acaataatat cgtaattgag ggaaaggtag
1901 gtcaagatgt cacctatttt tcgaaacggt ttgtatcata ttggtatcga
1951 gttcgacagg ttcaaacctc aaagggtatt gagaggaggt cgattgagga
2001 tgtcaaatat agggagtttg atatagaaag ttttaagcct tacgctattg
2051 gcgagatcgg tattcacgcg tcaacttaca agtatcagga tttattagcg
2101 gggcgtaatc gcggagaaaa agtgaaggac tcgcaagcgc tcgtgtggta
2151 tgatcttgct ttgactaatt acacactagt gcggccacaa gatagatgtt
2201 ggataatgtc gtgtactgat tctgaataca ctttgagatt cgcgatgatc
2251 actatgatat tcgagcgctt atctgaggag actgatcttt cttaccatga
2301 tattttattg agggttcgcg aatatccgat acaatcattc gcttcataca
2351 aacatttcta tgttcgcgta ttacagcacg tttttagaga ctaccaagag
2401 atcgatgtat tagagttctg tactaggatg ctcgatccga ggacacgtga
2451 gtcggggcta aacaagtttt cgagattcaa acaatggaga gaatcggaat
2501 tcttgataga tgctcttaag atgaattttc tcctgtgggt agtttttgaa
2551 ctggagaata tagacgttga ttatagcaag aagaggcacc ctttgctgat
2601 atctactgac aaaggattaa gagtagttcc agttgatctt ttcaattcta
2651 tgcttagtgt ttcttcgagc gggtggattc catatgttga aagagtgtgt
2701 gagcgttcgg agattaaaag gagattgaat gcagatgaat tgaaattaaa
2751 gaactggttc attgcgtatt atatcacttt gcccttgtta aggcgtgcgg
2801 aaccgaggat gagctttaag tatgaaggaa ttacaacttg gattggttca
2851 aactgtggtg gggtacgaga ttatctaatt caaatgctcc cagcgaggaa
2901 accgaagcca ggcgttttaa ttttagctta tggcgcggag actaacgtag
2951 cgtggttgaa ccatgcgcta cgtgatatac tttcgctaga ggggtcgtta
3001 gggatgatta ttatcagtga tggctcggtg gtgaataaaa gcaagctccg
3051 tgtgagagat atgaagatat ataatagggg agaagtagac agattaattt
3101 tgatttcaag tggggattac acatttggga acaaatatct cttatcgaaa
3151 ttaatggcta agattgaaca gtagcgtgac tgctactcca tgtgaataca
3201 cttac