Sequence of DPV Dasheen mosaic virus
Dasheen mosaic virus polyprotein gene, partial cds.
ACC No: AF048981
Dated: 2005-04-15 | Length: 3159 | CRC: 1156135277
!!NA_SEQUENCE 1.0
ID AF048981 standard; genomic RNA; VRL; 3159 BP.
XX
AC AF048981;
XX
SV AF048981.1
XX
DT 15-MAR-1998 (Rel. 55, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Dasheen mosaic virus polyprotein gene, partial cds.
XX
KW .
XX
OS Dasheen mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-3159
RA Li R.H., Zettler F.W., Hiebert E., Purcifull D.E.;
RT "Nucleotide sequence and expression of the coat protein (CP) gene of a
RT dasheen mosaic virus isolate (DsMV-Ch) from Caladium";
RL Phytopathology 84:1105-1105(1994).
XX
RN [2]
RP 1-3159
RA Li R.H., Zettler F.W., Hiebert E., Purcifull D.E.;
RT "The nucleotide sequence of the 3'-terminal region of Dasheen mosaic virus
RT (Caladium isolate) and expression of its coat protein in Escherichia coli
RT for antiserum production";
RL Unpublished.
XX
RN [3]
RP 1-3159
RA Li R.H., Zettler F.W., Hiebert E., Purcifull D.E.;
RT ;
RL Submitted (17-FEB-1998) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, University of Florida, 1435 Fifield Hall, Gainesville, FL
RL 32611-0680, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .3159
FT /db_xref="taxon:29271"
FT /mol_type="genomic RNA"
FT /organism="Dasheen mosaic virus"
FT /isolate="Caladium"
FT mat_peptide <1. .422
FT /note="NIa"
FT /function="protease"
FT /product="nuclear inclusion a"
FT CDS <1. .2912
FT /codon_start=3
FT /db_xref="GOA:O71953"
FT /db_xref="HSSP:1LVM"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="InterPro:IPR001730"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProt/TrEMBL:O71953"
FT /product="polyprotein"
FT /protein_id="AAC05494.1"
FT /translation="KREERVCMVGTNFQDKSMRATISEASLILPEGQGTFWKHWISTKD
FT GECGIPMVAVSDGYIVGFHGLGSNISERNYFVPFTDDFEQTHLKRLDSLEWTQHWHFQP
FT DKIAWGSLRLVNDQPTEDFKISKLISDLFENPVQLQGSQSGWVINTAEGNLKAVARCES
FT ALVTKHTVKGPCRYFSEYLSSNQEAEKFFRPFMGAYRSSRLNREAFKKDFFKYAKPVEL
FT NKVDFNAFQIAVASVETMMMETGFSECEYITDAQTIIDSLNMKAAVGAQYRGKKSEYFH
FT DMEVYDMERLLFQSCERLFYGKKGVWNGSLKAELRPIEKTQLNKTRTFTAAPLDTLLGA
FT KACVDDFNNQFYSLNLKCPWTVGMTKFYKGWDSLMRKLPEGWVYCHADGSQFDSSLTPL
FT LINAVVDIRKFFMEEWWVGEEMLDNLYAEIVYTPILTPDGTIFKKFRGNNSGQPSTVVD
FT NTLMVVISVYYACIKQGWTDYDVSQRIVFFANGDDIILAVQRDDEPILNTFQDSFHELG
FT LNYDFSERTMKREELWFMSHQAMKVGDVYIPKLERERIVSILEWDRSKEIMHRTEAICA
FT AMIEAWGYTDLLQEIRKFYLWLLEKDEFKTLASEGRAPYIAETALKKLYTDENIKECEL
FT QRYLDAFNFEMFCEHDEVVLQADDTVDARKNNNTTKTTETKTPATGGGNNTNNNTPPVD
FT NTTNNNPPPPPPAVTKVTEVPANKQVVPAASEKGKEVVKDVNAGTSGTYSVPRLNRITN
FT KMNLPLVKGKCILNLNHLIEYKPEQRDIFNTRATHTQFEVWYNAVKREYELEDEQMHIV
FT MNGFMVWCIDNGTSPDINGAWVMMDGNDQIEYPLKPIVENAKPTLRQIMHHFSDAAEAY
FT IELRNAEKPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPVRAREAVAQMKAAALSNVT
FT TRLFGLDGNVSTSSENTERHTAKDVTPNMHTLLGVSSPQ"
FT mat_peptide 423. .1970
FT /note="NIb"
FT /function="RNA polymerase"
FT /product="nuclear inclusion b"
FT mat_peptide 1971. .2909
FT /product="virion coat protein CP"
FT misc_feature 2913. .3159
FT /note="untranslated 3' end of virion RNA"
XX
SQ Sequence 3159 BP; 982 A; 608 C; 746 G; 823 T; 0 other;
AF048981 Length: 3159 April 19, 2005 08:49 Type: N Check: 7089 ..
1 caaagagaga ggagcgcgta tgcatggttg gcacgaattt ccaagataaa
51 agcatgcgcg ctacgatctc ggaagcatct ctcattctac cagaagggca
101 gggaacattc tggaaacatt ggatttcaac taaggatggg gagtgtggga
151 tccccatggt ggctgtgagt gatggatata tagttggttt ccatggcctt
201 ggctcaaaca tatctgagag gaactatttt gtccctttca ctgacgactt
251 cgagcaaaca catcttaaaa ggctcgatag tcttgaatgg acccagcatt
301 ggcactttca gcctgacaag atagcttggg gttcactcag actagttaat
351 gaccaaccta ctgaagattt taagatttca aagttaattt cagacctttt
401 cgaaaatcct gtacaattac aagggtctca aagtgggtgg gtgattaata
451 ctgccgaagg gaatctaaaa gctgttgccc ggtgtgaaag tgcactcgtg
501 acaaaacata cagtgaaggg accgtgcaga tacttctcag agtacttgag
551 ttcaaaccag gaagctgaaa agtttttcag accattcatg ggagcttatc
601 gctcaagtag acttaacagg gaagctttca agaaagactt ctttaagtat
651 gcaaagcctg ttgagttgaa taaagttgat ttcaatgcct tccagattgc
701 agtggcaagt gtggagacaa tgatgatgga aacaggattt agcgaatgtg
751 agtatatcac agacgctcaa acaatcattg actccctcaa tatgaaagca
801 gctgtggggg ctcaatatcg tgggaagaag tctgagtact tccacgatat
851 ggaggtctac gatatggaac gactcctctt ccaaagttgt gaaagactat
901 tctatgggaa gaagggagtc tggaatggct cattaaaggc agagttgcgt
951 ccaattgaga aaacgcaact caataaaaca aggacattta ctgccgctcc
1001 tcttgacaca ttgttaggag cgaaggcttg tgtggatgac tttaacaacc
1051 aattctatag tctcaaccta aagtgtccat ggacagttgg tatgaccaaa
1101 ttttataaag gttgggattc attgatgaga aagcttccag aaggatgggt
1151 ctactgccac gctgatgggt ctcagtttga ctcatcatta acaccactcc
1201 tcataaacgc ggtcgtggac atcaggaagt ttttcatgga ggagtggtgg
1251 gttggtgaag aaatgcttga caacttgtat gctgaaattg tctacacacc
1301 tatattgacc ccagatggaa caatttttaa gaaatttagg ggcaataata
1351 gtggacaacc atcgacagtc gtggataata cattgatggt tgtcatttca
1401 gtttactacg catgtatcaa gcaaggttgg acggattatg atgttagtca
1451 aagaatagtc ttctttgcaa atggtgatga catcatattg gctgtgcagc
1501 gagatgatga acccatcctt aatacctttc aggattcttt tcacgaattg
1551 gggctcaact atgatttctc tgagcgcacg atgaagagag aggaactttg
1601 gttcatgtcc catcaagcta tgaaagtagg ggatgtttat atccctaaac
1651 tagagcgaga gagaattgta tcaattttag aatgggatag aagcaaagaa
1701 atcatgcaca gaacagaggc aatttgtgca gctatgatag aagcatgggg
1751 ttacactgac ctcttgcaag aaataaggaa attctatcta tggctgcttg
1801 aaaaagatga atttaagaca ctagcctctg aagggcgggc accatatatt
1851 gctgaaacag cactcaagaa gctatacaca gatgaaaaca taaaggagtg
1901 cgagcttcag cgttatctgg atgctttcaa ttttgaaatg ttctgcgaac
1951 atgatgaggt tgtgttgcag gctgatgata cagttgatgc aaggaaaaac
2001 aacaatacta caaaaacaac tgaaacaaaa acacctgcaa cgggtggtgg
2051 gaacaacaca aacaacaaca cgccacctgt agataacaca accaacaata
2101 atcctccacc gccaccaccg gcggttacaa aggtaacaga ggtacccgcc
2151 aataagcaag tggtcccagc agcaagtgag aaaggtaagg aagttgtgaa
2201 agatgttaac gctggcacta gtggcacata ctccgtacct cggttgaata
2251 gaatcacaaa caaaatgaat ttacctttag ttaaaggtaa atgcatttta
2301 aatttgaatc atttaatcga gtacaagcca gaacagcgtg acatattcaa
2351 taccagagcc acccacactc aatttgaagt ctggtacaat gctgtcaaga
2401 gagaatacga gcttgaggat gagcagatgc acatagttat gaatggtttt
2451 atggtttggt gcatcgataa tggaacatca cctgatatca acggggcttg
2501 ggtgatgatg gacggaaacg atcaaattga atacccgttg aagccaattg
2551 ttgaaaatgc aaaaccaacc ttgcgtcaga taatgcatca cttttctgac
2601 gcagcagagg catacattga actgagaaac gcagagaaac cgtatatgcc
2651 tagatacggt cttattcgca atttacgtga tgcaagtctc gcccggtatg
2701 cttttgactt ttatgaggtc aattctaaaa caccggtgcg agcaagagaa
2751 gcagttgcgc aaatgaaggc ggctgcactc tctaacgtta ccactaggtt
2801 gtttggtttg gatggtaacg tttcaacttc aagcgagaac actgaaaggc
2851 acactgcaaa agacgtcaca ccaaacatgc acactttact tggtgtttcg
2901 tctccgcagt aaaggtctgg taaacagggc cgacagttat tggctcgctg
2951 tttgtagttt tatttatata aagtattgtt tgtattcaag tagtgctatt
3001 tggttataaa ctacagcgtg gttttccacc gatgtggagt tggctttgca
3051 ccctattatc tacgtccttt atgtatttga aaactactga actactgcac
3101 ctacgtcaga ccgcaaggcg atgggcgcgg taggcgagac gcttcgtgca
3151 cggtgttca