Sequence of DPV Bean common mosaic virus
Peanut stripe virus strain Ts clone TS4 polyprotein gene, partial cds.
ACC No: AF063222
Dated: 1998-12-02 | Length: 1356 | CRC: -1218264602
!!NA_SEQUENCE 1.0
ID AF063222 standard; RNA; VRL; 1356 BP.
XX
AC AF063222;
XX
SV AF063222.1
XX
DT 02-DEC-1998 (Rel. 57, Created)
DT 02-DEC-1998 (Rel. 57, Last updated, Version 1)
XX
DE Peanut stripe virus strain Ts clone TS4 polyprotein gene, partial cds.
XX
KW .
XX
OS Peanut stripe virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1356
RA Pappu S.S., Pappu H.R., Chang C.A., Culbreath A.K., Todd J.W.;
RT "Differentiation of biologically distinct Peanut stripe potyvirus strains
RT by a nucleotide polymorphism-based assay";
RL Unpublished.
XX
RN [2]
RP 1-1356
RA Pappu H.R.;
RT ;
RL Submitted (05-MAY-1998) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Coastal Plain Experiment Station, University of Georgia,
RL Moore Highway, Tifton, GA 31793-0748, USA
XX
DR SPTREMBL; Q9YK86; Q9YK86.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1356
FT /db_xref="taxon:28353"
FT /organism="Peanut stripe virus"
FT /strain="Ts"
FT /specific_host="Arachis hypogea"
FT /lab_host="Vigna unguiculata"
FT /clone="TS4"
FT CDS <1. .1104
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9YK86"
FT /product="polyprotein"
FT /protein_id="AAC82371.1"
FT /translation="MIEAWGYPELLQEIRKFYLWLLERDELKEIAASGGAPYIAESALK
FT TLYTNKRTRIEELAKYLAVLDFDYEVGCGESVHLQSGNNTPQPPVVDAGVDTGKDKKEK
FT SNEGKGSESGEGSGNNSRGTENQSMRDKDVNAGSKGKVVPRLHKITKRMNLPMVKGNVI
FT LNLDHLLDYKPEQTDLFNTRATKMQFEMWYNAVKGEYEIDDEQMSIVMNGFMVWCIDNG
FT TSPDVNGTWVMMDGDEQIEYPLKPMVENAKPTLRQIMHHFSDAAEAYIEMRNSERPYIP
FT RYGLLRNLRDKNLARYAFDFYEVTSKTSDRAREAVAQMKAAALSNVNSKLFGLDGNVAT
FT TSENTERHTARDVNQNMHTLLGMGSAQ"
FT mat_peptide <1. .240
FT /product="RNA polymerase"
FT mat_peptide 241. .1101
FT /product="capsid protein"
FT 3'UTR 1105. .1356
XX
SQ Sequence 1356 BP; 430 A; 236 C; 347 G; 343 T; 0 other;
AF063222 Length: 1356 December 21, 2001 14:51 Type: N Check: 9166 ..
1 atgattgaag catggggcta tcctgaattg ctccaagaaa ttaggaaatt
51 ttacttgtgg ctgcttgaga gagatgagct caaagagatt gcagctagtg
101 gaggagctcc gtacatagca gagtcagcgc tcaaaacact ttacaccaac
151 aaaagaacaa gaattgaaga gctggcaaag tatttggccg tgcttgattt
201 tgactatgaa gttggatgtg gagaatctgt gcatctacaa tcagggaaca
251 acacaccaca accaccagtg gtggatgctg gcgtggatac tggcaaggat
301 aagaaagaga agagcaatga agggaaaggc tctgaaagcg gtgaaggatc
351 gggtaataat agccgtggaa cagagaatca gtcaatgaga gacaaagatg
401 tgaatgctgg ttcaaaagga aaggttgttc ctcggcttca taagatcaca
451 aagagaatga atttgccaat ggtgaaagga aatgtgatct tgaatttaga
501 ccatctattg gattacaagc cagagcaaac tgatctcttc aacacaagag
551 caacaaagat gcagtttgaa atgtggtaca atgctgtgaa gggcgagtat
601 gaaatagatg atgaacagat gtcaattgtg atgaatggct ttatggtttg
651 gtgtattgac aatggcactt caccagatgt aaatggtaca tgggtgatga
701 tggatggaga tgagcaaata gaatatcctc ttaaaccaat ggttgagaat
751 gcaaaaccaa cacttcgtca aatcatgcac catttctcag atgcagctga
801 agcatatatt gagatgagaa attctgagcg accgtacata cctaggtacg
851 gattgcttcg gaatttgagg gacaaaaatc tagctcgcta cgctttcgac
901 ttctatgaag tgacttccaa gacatcagat cgtgcaaggg aagcagtagc
951 acagatgaag gcagcagccc tcagcaacgt aaacagcaag ttgtttggac
1001 ttgatgggaa cgtggcaaca accagcgaga atactgaaag gcacactgca
1051 agggacgtca accagaacat gcatacactt cttggcatgg gttctgcgca
1101 gtagagattg ggtcaactga tcacagttag catctcgcgt cgctgaataa
1151 tttcatatag taatctttat gttctcttta gtttcagtgt ggttttacca
1201 ccattgtcta actattgtga tagtgtggtt ggtccaccaa catattgtga
1251 gtactttatg tttatgagta agccggaaga accattgcaa tggtgagggc
1301 gtgcagagtg atttcatcac gtgtcatgag gtagctacgg caatgtttgt
1351 tgttct