Sequence of DPV Wheat yellow mosaic virus
Wheat yellow mosaic virus RNA1 270 kDa precursor protein gene, complete cds.
ACC No: AF067124
Dated: 2004-07-02 | Length: 7644 | CRC: -806743256
!!NA_SEQUENCE 1.0
ID AF067124 standard; genomic RNA; VRL; 7644 BP.
XX
AC AF067124;
XX
SV AF067124.2
XX
DT 28-JUL-1999 (Rel. 60, Created)
DT 02-JUL-2004 (Rel. 80, Last updated, Version 3)
XX
DE Wheat yellow mosaic virus RNA1 270 kDa precursor protein gene, complete
DE cds.
XX
KW .
XX
OS Wheat yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-7644
RA Yu J., Yan L., Su N., Hou Z., Li D., Han C., Cai Z., Liu Y.;
RT "Analysis of nucleotide sequence of wheat yellow mosaic virus genomic
RT RNAs";
RL Sci. China, C, Life Sci. 42:554-560(1999).
XX
RN [2]
RP 1-7644
RA Yu J.;
RT ;
RL Submitted (18-MAY-1998) to the EMBL/GenBank/DDBJ databases.
RL National Laboratory for Agrobiotechnoloy, China Agricultural University,
RL No. 2 Yuanmingyuan West Rd., Beijing 100094, People's Republic of China
XX
RN [3]
RC Sequence update by submitter
RP 1-7644
RA Yu J.;
RT ;
RL Submitted (30-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL National Laboratory for Agrobiotechnoloy, China Agricultural University,
RL No. 2 Yuanmingyuan West Rd., Beijing 100094, People's Republic of China
XX
CC On Jun 30, 2004 this sequence version replaced gi:5596367.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7644
FT /chromosome="RNA1"
FT /country="China"
FT /db_xref="taxon:75746"
FT /mol_type="genomic RNA"
FT /organism="Wheat yellow mosaic virus"
FT /strain="C"
FT /isolate="HC-1"
FT /specific_host="Triticum aestivum"
FT /clone="pGWY30; pGWS409; pGWS12"
FT 5'UTR 1. .162
FT CDS 163. .7386
FT /codon_start=1
FT /db_xref="GOA:Q9QMA1"
FT /db_xref="UniProt/TrEMBL:Q9QMA1"
FT /note="encodes viral coat protein and polymerase"
FT /product="270 kDa precursor protein"
FT /protein_id="AAD45560.1"
FT /translation="MEQTAAQAAARHATHTNSAQEQPPVSPMNLSANFVAPELFYASNV
FT EKIKSIMRMRRPTRIIDAISRDFELVAFLILSPAHLMQLETTLRCEMKSSIVPIANSDA
FT GFETCAVLKTALDGMKYHFGTTTLEQGWTSMMKHADSCLQESSSSAVAMLQTQVQKVGS
FT LLISGKNRVESCELYVLHLTARAFRTEYGLKGTCFGEHCALLHDLKACVCGTVPKEFLW
FT AKTKKHSMFTIPEWIARTPTDCFMLCLRAIPIFRRCTMAMSLLYWSCVATVNFPSVMAF
FT LFKRQFTKYIAHSFAKHSIYFLMLGIVALLWAFRTYASKNPKIALQARSANEKEKKLMM
FT LLASAVGITYLFDYDIAEALGNSLHKISRLSSYLMDDHQGIASRMFSATHGLQAGDNTE
FT DAVTTIISDLLSITFQIVDEDVTAGVLEEVSDTTFSSWVSVNTLAGRNMSRPLQYPVNQ
FT TYPLTPMNVLLQLQAMVDSDNGWSMVVGHTGSGKSTYLPVQYSNYLAKKLDRRQQILVC
FT EPTQAATENVCSGIAANLGGAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPGFISTF
FT DAIFLDEAHDVKEHSLVFESICNNFKSVRKFYVSATPRDGSSCPDATRKFPLTVQQSVC
FT DSYKKFIAAQGGDDLLDVTRYDTVLVFLAGRPECVKAANAWNANITGEKRAFSLSSDNF
FT ATDFAMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGYTMRPSLDLNHKTLRLERRR
FT VTANERKQRIGRAGRLKEGHAMCVGDEDRSVNVVSPGCLYGCGLLSFKHNVPFYMNDTF
FT ESSWLEGVTKSQADTMTIFKLPIFLTRDLVNSDGSVAKEFLDILNKHQFTTSDIKQAPH
FT SIARHLFPTWASYFALFQSINYGEEKDEIPSNLRHARVPFSISTLSKFDWNALALACKQ
FT HRPTVASSFQSLDQPARVVTLQTNSANILGSIAHLCNMRNNYKTLIDSNNHVKQSMATN
FT VMFKWFSSSHITANLDRNLSRCLANLSVVETTISALKQISAENSQVMASPTLQSHLENI
FT IGELQSNDMLTDETLSNALGIFNPKTNLFLLLATKGFKLVYVICLLILINLIYRLLSHW
FT RAWLKNKNDNVNSDALTNTMTVQEGSEILKEVLKMTPAMRREVTKDMKVAVAVADNDST
FT FLSCFPYEHIDLEGKGNQYRPREDARLMYSTRDDATFDTWNEKAKEKRQKISDRAEPEM
FT KQPYQKRPYYNFYDLQTDSNILEAIFYTTEGDEFFRTANPNKDMHSVAEKLKAFLDTKP
FT IIGRLQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQES
FT PALESPYELEAEFGNSKDEVMLEASTGILLSQVSVDVATRIGRISIGTFNVNCFLYSDW
FT ILAPAHFQDRNGAVTIEFPDQTVSTTTDNLNAHGVKRFYGLDLIAIRRPPSLRPEKKLV
FT KAFAITEPVIAQMVFIDSQGIRKFSQSDWIRREAGSNRWSHKISTQNGMCGCLFWMLER
FT TVSLGIHVATNRTTGRNEFQPFSREAVDFINGPGNKVPFSPWTFNRPACGYRQGEATFD
FT SRTIQNQASDTLSKINNSILGFGSDLKGQLVQPVTPALRTRFEALFGGGSFELVGTMNK
FT GLIDKHIIVGENDNVHDFMREHPTFAWLQGFMDEYAPSVLNYSAYYKDLCKYNRKKHQL
FT SFNPHELRSATAGMIRMLEDAGLTQGDVRTPQQVVSDMQWNTSAGPSYQGKKRDVCAHL
FT SEQEVLHLAETSRHRFLACNSIGIWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAMK
FT FYVDDFNKKFYATNLKAPHTVGINKFSRGWEMLHDKLNRPGWLHGSGDGSRFDSSIDPF
FT FFDIIKEIRKHFLPVEHHRAIDLIYDEILNTNICLANGMVIRKNVGNNSGQPSTVVDNT
FT LVLMVSFLYAYIHKTGDHMLKKLNDRFVFVCNGDDNKFAISPEFDAEFGHDFSPELTEL
FT GLTYEFDDITDDICANPYMSLTMVRTPFGIGFSLPVERIVAIMQWAKKGGVLHSYLAGI
FT SAIYESFNTPKLFKSVYAYLLWLTEEHGSDILAAMTGTATALPIPSMLDVYRLHYGDSS
FT IELQAADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVKKASDDKKARD
FT LTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKLKSAPKSIVEH
FT DNSVALDSEVKKWSDAVRTSLGITTDEAWFNALIPFLGWCANSGASDKHAENQTMQVDN
FT GTGALTEMSLSPFIVHARLNGGLRRILRAYSDETLLLLQEHKIVTKWAMKHGASAHAAY
FT AFDFFFPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNRRVLDTDGHPE
FT LT"
FT 3'UTR 7387. .7644
XX
SQ Sequence 7644 BP; 2177 A; 2019 C; 1670 G; 1778 T; 0 other;
AF067124 Length: 7644 July 6, 2004 08:46 Type: N Check: 6236 ..
1 aaaataaaac caccacaaac caaaaccatc aaaacgatca caagctaaca
51 cataccttct gcttcctttt gagcccaagc tttcgtctct cactcccctc
101 gcgacgcctc actctttcca atccagccct tcgcctttgc cttcttcttc
151 actcccttcg agatggagca gacagcagcc caggctgccg cgcgccacgc
201 cacacacacg aactccgcac aagagcagcc tcctgtcagc cctatgaatc
251 tgtctgcaaa ctttgttgcc cctgagcttt tctacgcttc aaatgtcgag
301 aagatcaaga gtatcatgag gatgcgtaga ccgacgcgca tcattgatgc
351 gatatccagg gatttcgaac ttgttgcttt tctcatactc agccccgcac
401 atctcatgca gctagaaacc acactacgct gcgagatgaa atccagcatt
451 gtacctattg caaactcaga tgctggtttt gagacttgcg ccgtcctcaa
501 aacagcgctc gatggaatga agtatcactt tggaacaacc acactcgagc
551 aaggctggac atccatgatg aaacacgctg acagctgcct gcaagagagt
601 tcttcctctg ccgtcgccat gttacaaact caagtccaga aagtcggctc
651 cctcttaatc agcggaaaaa atcgcgtaga aagttgcgaa ctttatgtct
701 tacacctcac cgcgcgcgct ttcaggaccg aatatggatt aaagggtact
751 tgctttggag aacactgcgc tttgttgcac gacttaaaag catgcgtttg
801 tggtaccgtg ccaaaagagt ttttgtgggc gaaaaccaaa aagcactcca
851 tgttcactat cccagagtgg atcgcacgta cgccaacaga ctgtttcatg
901 ctgtgtcttc gcgctatacc tatctttcgt aggtgcacga tggcaatgtc
951 tttactttat tggtcgtgtg tagcaactgt taacttccct tctgttatgg
1001 cttttctttt taagcgtcag ttcactaaat acatagccca ttccttcgcc
1051 aagcactcca tctatttcct tatgttaggt attgtagccc tactatgggc
1101 atttcgcact tatgcttcga aaaacccaaa aatagctctc caagctagga
1151 gcgcaaacga aaaggaaaag aaactgatga tgttactcgc aagcgccgtt
1201 ggaatcacat atctatttga ctacgacatc gcagaagccc tagggaattc
1251 cctccataaa ataagtcgct tgtcgtctta tctaatggat gatcatcaag
1301 gaatagcctc tcgcatgttt agcgctactc acggacttca agctggggac
1351 aatacggagg atgcagtcac cacaatcatt agtgatctct tgtctatcac
1401 ctttcaaatt gtcgacgaag atgtaactgc tggagtttta gaagaggtca
1451 gcgacacaac tttcagtagt tgggttagcg ttaacactct cgctggaagg
1501 aacatgtcac gccccctgca ataccctgtg aatcagactt acccactcac
1551 accaatgaac gttttgctgc aactccaagc tatggttgat tcggacaatg
1601 gttggtcaat ggtcgttgga cacacgggat ctggaaaatc cacgtatctt
1651 cctgtccagt actctaacta ccttgccaag aaacttgacc gccgccaaca
1701 aattctagtt tgcgagccta cgcaagcagc cacagaaaat gtctgctcag
1751 gaattgctgc caacttagga ggagctgtgt atggaagaca tgaaggttgg
1801 tcgcgcatgg gagatcactg cattcaagtt atgacttacg gatcagctct
1851 acagtgccac gcaatggatc caggcttcat atcaaccttt gacgcaatat
1901 tccttgatga agctcacgat gtcaaagagc attcacttgt cttcgaaagc
1951 atctgcaaca acttcaagtc tgttagaaag ttctacgtat cagcaacccc
2001 ccgagatggc agttcatgcc cggatgcaac acgcaaattc cctctaacag
2051 ttcagcagag tgtgtgcgat tcatataaga aattcatagc tgcacagggt
2101 ggagatgatc ttctcgacgt cactagatac gacaccgttc ttgtttttct
2151 tgctggaaga ccagaatgcg ttaaagctgc aaatgcatgg aatgctaaca
2201 tcactggaga gaagcgagct ttctcgctat caagcgacaa cttcgccacc
2251 gattttgcaa tgctaacgga gcgcctcaaa acgcacaaaa ccatcatctt
2301 cacaacgaac atcatcgaaa ctggtgttac tcttagcgtt gactgtgttg
2351 ttgactttgg ctatactatg cgaccctccc tcgatctaaa ccacaaaaca
2401 ctacgccttg aacgccgtag agtgactgcg aatgagagaa agcaaaggat
2451 cggtagagct gggcgtctca aggagggaca tgccatgtgt gtgggggatg
2501 aagatcgatc tgtcaatgtc gtctcccccg gatgtctgta tgggtgcggg
2551 cttcttagct tcaagcacaa tgtgcccttc tacatgaacg acacctttga
2601 aagctcgtgg cttgaaggag ttactaagtc tcaggctgac actatgacaa
2651 ttttcaagct ccccatattc ctaacgcgcg atcttgttaa ctccgacggc
2701 tctgtagcaa aggagtttct tgacattctg aacaagcacc agttcacaac
2751 gagcgacatc aagcaagcgc cacacagcat agctcgtcac ctctttccaa
2801 cttgggcctc atactttgca ctcttccaat caatcaacta cggagaggag
2851 aaagacgaga tccccagcaa ccttcgccat gcgcgagttc ccttctccat
2901 ttcaacgctg tctaaattcg actggaatgc cttggcgctt gcatgtaagc
2951 agcatcgccc aacagtggca agctcattcc aaagccttga tcagccagcc
3001 cgcgttgtca ccctacaaac aaactctgca aacatcctcg gaagcatcgc
3051 ccatctctgc aacatgcgta acaattacaa aaccttgatt gacagcaaca
3101 accatgtaaa gcaatcaatg gcaaccaacg tcatgttcaa gtggttctca
3151 tcatcccaca tcacagctaa tcttgacagg aatttatccc gatgcttagc
3201 caacttgtca gttgtggaaa ccacgattag cgcgctaaag cagatttcag
3251 ctgaaaactc gcaggtgatg gcttctccaa cacttcagag tcacctagag
3301 aacataatcg gagaactaca atcaaacgat atgttgactg atgaaacatt
3351 gtcaaacgct ctaggcattt tcaacccaaa gaccaacctc ttcctccttc
3401 tcgcaactaa aggttttaaa cttgtctacg ttatctgcct gcttatatta
3451 ataaacctca tctaccgctt gctctcccac tggagagctt ggttgaagaa
3501 caagaacgat aacgtgaact ccgatgccct caccaacacc atgacagttc
3551 aggaaggaag cgaaattctc aaggaagtat tgaagatgac tccagcgatg
3601 cgcagggagg tgaccaagga tatgaaagtt gcagttgcag ttgctgataa
3651 tgacagcaca tttctttcgt gtttccctta cgaacacatt gacctcgagg
3701 gaaagggaaa ccagtatcga ccacgagagg acgcacgtct gatgtactcc
3751 acgagagacg acgcaacctt cgatacatgg aacgagaaag ctaaggagaa
3801 aaggcagaag atatcagacc gcgcagagcc agagatgaaa caaccttacc
3851 agaagcgtcc atactataac ttctacgacc ttcaaactga tagcaacatt
3901 ctcgaggcaa tattctacac cacggaaggt gacgaattct tccggacggc
3951 aaatcccaac aaggacatgc actcagtagc tgaaaaacta aaagccttcc
4001 ttgacacaaa accaatcata ggcagactcc agcgccagct ccttgaggaa
4051 accgctcagg tcgttatcaa agacgacaaa ggcactgccc acagaatgga
4101 catatcaacc cacaacccta acactcttaa gaacaatgga tcaggaagag
4151 ttgggtatga tgagcatcgc ggcgatttca ggcaagaaag ccctgcactt
4201 gagtcaccgt acgagttgga agctgaattt ggaaactcaa aggatgaagt
4251 catgcttgaa gcatcaacag gaattctcct atcccaggtc agcgttgatg
4301 ttgcgactcg aattggaaga ataagcatcg gaacgttcaa tgtcaattgc
4351 ttcctctaca gtgattggat actagcacct gctcattttc aggatcgaaa
4401 cggcgccgtc accatcgaat tcccagacca aacggtgagt accacaaccg
4451 acaatttaaa tgcgcacggt gttaagcgat tttacggact tgacctcata
4501 gccattcgga gaccaccaag cctccgacct gagaaaaagc tcgttaaagc
4551 gttcgccatc acagagccag tgatagcaca gatggtcttc attgacagcc
4601 aagggatccg aaagttttct caatccgact ggatcagacg ggaagctggc
4651 tctaacagat ggtcacacaa gatctcaact caaaatggga tgtgtggatg
4701 cctgttttgg atgttggaaa gaaccgtctc attgggaatt cacgttgcca
4751 cgaaccgcac cacaggacga aatgaattcc agcccttctc acgcgaggct
4801 gtcgacttca tcaacgggcc aggaaacaag gttcctttca gcccttggac
4851 ctttaaccgc cccgcctgtg gatacaggca aggagaagcc accttcgatt
4901 cacgcaccat acagaaccaa gcctccgaca ctctcagcaa gatcaacaac
4951 tccatccttg gctttggaag tgatttgaaa ggccagcttg ttcaacccgt
5001 aacaccagct ctacgcactc gctttgaggc cctgttcggt ggtggaagct
5051 tcgaactcgt cggaacaatg aacaaaggac tcatagacaa acacataatt
5101 gttggggaga acgacaacgt tcatgatttc atgagagagc accccacttt
5151 tgcttggctt cagggtttca tggacgaata cgcaccaagt gtcttgaact
5201 actcggctta ctacaaggat ctttgcaagt acaataggaa gaagcaccaa
5251 ctctccttca accctcacga gcttcggagt gccaccgctg gaatgatcag
5301 aatgttggaa gacgccggcc taactcaagg cgacgtgagg acaccccaac
5351 aggttgtttc agacatgcag tggaacactt ccgccggacc aagctaccag
5401 ggcaagaaaa gagacgtttg cgcacatctc agcgagcagg aagttctaca
5451 ccttgcagaa acgtcgcgac acagatttct agcctgcaat tccatcggca
5501 tttggaacgg atcgctcaaa gcagagctta ggacgattga gaaagtagaa
5551 gctgagaaaa ccagagtttt cacggcttcg ccaatcacga gcctattcgc
5601 catgaagttc tacgttgacg atttcaacaa gaagttctat gcgacaaacc
5651 tgaaagctcc acacacggta ggaatcaaca aattcagcag aggctgggaa
5701 atgctccacg acaagctcaa ccgcccaggt tggcttcacg gcagtggcga
5751 tgggtcacga ttcgatagtt caattgaccc tttcttcttc gacataatca
5801 aggagattcg aaagcacttt ctaccagttg agcaccatcg cgcaatcgac
5851 ctaatatacg acgagattct caacaccaac atttgtttgg caaatggcat
5901 ggtgattcga aagaacgttg ggaataacag cgggcagcca agcacggtcg
5951 tagacaacac acttgttctc atggtctctt ttctctacgc ttacattcat
6001 aaaaccgggg accatatgct caagaaactc aacgacagat ttgttttcgt
6051 ctgcaatggt gacgacaaca aatttgccat ttccccagaa ttcgacgccg
6101 agttcggtca cgacttttca ccggagctca cagagctagg tttgacgtac
6151 gagtttgacg acataacaga tgacatctgt gcaaacccct acatgtccct
6201 gaccatggtc cgcactccct ttggaattgg gttctctttg cccgtggaac
6251 gcattgtagc aataatgcag tgggctaaga agggcggcgt tctgcactct
6301 tacttggcag gaatctcagc catttacgaa agcttcaaca caccaaagtt
6351 gttcaaatca gtgtatgcgt atttgttatg gctgacagag gaacacggct
6401 ctgacatcct agctgcgatg accggaacag cgacagctct cccaattccc
6451 tccatgctcg atgtgtaccg cctccactat ggcgatagca gcattgagct
6501 ccaagcagct gacacacaaa cagacgcgca gaaggaggaa gctcgactgg
6551 cagccgccac caagaaggca gccgatgatg ccgacgctgc gcgtctccgc
6601 aaggttgaag cagatcgtgt tgaggccgca agagtgaaga aagcgagcga
6651 tgacaagaaa gccagggacc tcacagcaac caaggttgat gatggcaaaa
6701 ttgttgccga cgctggaaca aaaaggacca atgccgccac caaagagaaa
6751 tggtcacttc cagaaacaaa acccgtcaac gcaggactaa agcttcgaat
6801 ctcaatggac aaattaaaga gcgcacccaa atctatagtc gaacacgaca
6851 actccgtcgc tctagattca gaagttaaga agtggtcaga cgctgtacgg
6901 acaagtcttg gcatcaccac ggatgaggca tggttcaatg ccctcattcc
6951 cttcctcgga tggtgcgcca acagtggcgc ttcagacaaa cacgcagaaa
7001 accagaccat gcaagttgat aatggaactg gagctttaac cgagatgagt
7051 ctctccccat tcattgttca cgctaggttg aatggtggct tgagacggat
7101 cctgcgagcc tacagtgatg aaactttgct tctccttcag gaacacaaga
7151 ttgtcacaaa atgggccatg aaacacggcg catctgcaca cgccgcgtac
7201 gcttttgatt tctttttccc ccgcccgtgg atgaacccac aggacatcga
7251 agttgcgaaa caagcacgtc ttgctgcttt aggcacaggt acatacaata
7301 ccatgctcac ctccgacaca accaacctcc gcaagacaac caaccgcagg
7351 gttctggata ctgatggaca cccagaacta acctaaacca taacccccct
7401 ccgcctttta tattttgcac tttaaatttt cgcaaaccat caccaccttt
7451 cacggccacg gttacgatct ttaatttctg cacttgtatc aggctcggga
7501 cggttctatg cacaatatgt cttcgacagt tgccaaacca gtattttcca
7551 cgaggaagag tatggcgagc ttgagcagcc gtttttaatc atacgtcgtt
7601 gtatggtggc gcattcagtg cgtttacgag taccagaagg taat