Sequence of DPV Turnip mosaic virus

Turnip mosaic virus strain GAT polyprotein mRNA, partial cds.

ACC No: AF103787

Dated: 1999-04-06 | Length: 944 | CRC: 1592072985

                !!NA_SEQUENCE 1.0
ID   AF103787   standard; RNA; VRL; 944 BP.
XX
AC   AF103787;
XX
SV   AF103787.1
XX
DT   06-APR-1999 (Rel. 59, Created)
DT   06-APR-1999 (Rel. 59, Last updated, Version 1)
XX
DE   Turnip mosaic virus strain GAT polyprotein mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-944
RA   Sohn S.-H., Choi H.-S., Jeon W.-B., Ryu T.-H., Hwang Y.-S.;
RT   "The coat protein gene of Turnip Mosaic Virus isolated from Brassica juncea
RT   in Korea";
RL   Unpublished.
XX
RN   [2]
RP   1-944
RA   Sohn S.-H., Hahn J.-H., Hwang Y.-S.;
RT   ;
RL   Submitted (02-NOV-1998) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, National Institute of Agricultural Science and Technology,
RL   Suwon 441-707, Republic of Korea
XX
DR   SPTREMBL; Q9WA63; Q9WA63.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .944
FT                   /country="South Korea"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /strain="GAT"
FT                   /specific_host="Brassica juncea"
FT   CDS             <1. .899
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:Q9WA63"
FT                   /product="polyprotein"
FT                   /protein_id="AAD20298.1"
FT                   /translation="DGVEVCVYHQAGETLDAGLTEEQKQAEKERKERERSEKERERQRQ
FT                   LALKKGKNAAQEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLVHLILY
FT                   TPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMW
FT                   VMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRKLT
FT                   DMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTGRHT
FT                   TEDVNRNMHNLLGVKGL"
FT   mat_peptide     33. .896
FT                   /note="CP"
FT                   /product="coat protein"
XX
SQ   Sequence 944 BP; 304 A; 186 C; 250 G; 204 T; 0 other;

AF103787  Length: 944  December 21, 2001 14:51  Type: N  Check: 9953  ..

       1  aagatggtgt tgaagtgtgt gtttatcacc aggcaggtga gacgcttgat
      51  gccggtctaa cagaagagca gaagcaggct gaaaaggaga gaaaggagag
     101  agagagatca gagaaagagc gagaaaggca aagacagcta gcgcttaaga
     151  aaggcaaaaa cgcagcacaa gaagagggcg aacgtgacaa tgaagtaaac
     201  gccggaactt ccggaacttt tagcgtgcct agactcaaaa gtcttacaag
     251  caaaatgcgt gtgccgaagt atgagaaaag agttgctctc aacctcgttc
     301  atttgatctt atacacgccg gagcagacag atttatccaa cacgcgttca
     351  acgcgaaagc agtttgacac ttggtttgaa ggtgttatgg ctgactatga
     401  gctaacggag gataaaatgc aaataattct caatggttta atggtctggt
     451  gcattgagaa tggaacctcc ccgaacataa acggaatgtg ggtgatgatg
     501  gacggcgatg atcaggtgga attcccgatc aaaccgctca ttgaccacgc
     551  caaacccaca tttaggcaga taatggccca tttcagtgac gtagctgaag
     601  cgtacattga aaagcgtaac caagaccgac catacatgcc acgatatggt
     651  cttcagcgca agttaaccga catgagctta gctcgttacg cgtttgactt
     701  ctacgaaatg acttctagaa ctccaatacg tgcgagagag gcacacatcc
     751  agatgaaagc agcagcactg cgtggcgcaa ataataattt gttcggcttg
     801  gatggtaacg tcggcacaac ggtagagaac acgggaaggc atacgaccga
     851  ggacgttaat cggaacatgc ataacttact tggcgttaag gggttatgaa
     901  gttgtatgct agtagactat aagtagttaa gtttactcgt tagt