Sequence of DPV Turnip mosaic virus

Turnip mosaic virus strain RG polyprotein mRNA, partial cds.

ACC No: AF103789

Dated: 1999-04-06 | Length: 944 | CRC: -575137006

                !!NA_SEQUENCE 1.0
ID   AF103789   standard; RNA; VRL; 944 BP.
XX
AC   AF103789;
XX
SV   AF103789.1
XX
DT   06-APR-1999 (Rel. 59, Created)
DT   06-APR-1999 (Rel. 59, Last updated, Version 1)
XX
DE   Turnip mosaic virus strain RG polyprotein mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-944
RA   Sohn S.-H., Choi H.-S., Jeon W.-B., Ryu T.-H., Hwang Y.-S.;
RT   "The coat protein gene of Turnip Mosaic Virus isolated from Radish in
RT   Korea";
RL   Unpublished.
XX
RN   [2]
RP   1-944
RA   Sohn S.-H., Hahn J.-H., Hwang Y.-S.;
RT   ;
RL   Submitted (02-NOV-1998) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, National Institute of Agricultural Science and Technology,
RL   Suwon 441-707, Republic of Korea
XX
DR   SPTREMBL; Q9WA65; Q9WA65.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .944
FT                   /country="South Korea:GeoChang area"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /strain="RG"
FT                   /specific_host="radish"
FT   CDS             <1. .899
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:Q9WA65"
FT                   /product="polyprotein"
FT                   /protein_id="AAD20300.1"
FT                   /translation="DGVEVCVYHQAGETLDAGLTEEQKQAEKERKERERSEKERERQRQ
FT                   LALKKGKNAAQEESERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLVHLILY
FT                   MPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIIRNGLMVWCIENGTSPNINGMW
FT                   VMMDGDDQVEFPINPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRKLT
FT                   DMSLARYAFDFYEMTSRTPIRPREAHIQMKAAALRGANNNLFGLDGNVGTTVENTGRHT
FT                   TEDVNRDMHNLLGVKGL"
FT   mat_peptide     33. .896
FT                   /note="CP"
FT                   /product="coat protein"
XX
SQ   Sequence 944 BP; 306 A; 183 C; 248 G; 207 T; 0 other;

AF103789  Length: 944  December 21, 2001 14:51  Type: N  Check: 9679  ..

       1  aagatggtgt tgaagtgtgt gtttatcacc aggcaggtga gacgcttgat
      51  gccggtctaa cagaagagca gaagcaggct gaaaaggaga gaaaggagag
     101  agagagatca gagaaagagc gagaaaggca aagacagcta gcgcttaaga
     151  aaggcaaaaa cgcagcacaa gaagagagcg aacgtgacaa tgaagtaaat
     201  gccggaactt ccggaacttt tagcgtgcct agactcaaaa gtcttacaag
     251  caaaatgcgt gtgccgaagt atgagaaaag agttgctctc aacctcgttc
     301  atttgatctt atacatgccg gagcagacag atttatccaa tacgcgttcg
     351  acgcgaaagc agtttgacac ttggtttgaa ggtgtcatgg ctgactatga
     401  gctaacggag gataaaatgc aaataattcg caatggttta atggtctggt
     451  gcattgagaa tggaacctcc ccgaacataa acggaatgtg ggtgatgatg
     501  gacggagatg atcaggtgga attcccgatc aatccgctca ttgaccacgc
     551  caaacccaca tttaggcaaa taatggccca tttcagtgac gtagctgaag
     601  cgtacattga aaagcgtaac caagaccgac catacatgcc acgatatggt
     651  cttcagcgca agttaaccga catgagctta gctcgttacg cgtttgattt
     701  ctacgaaatg acttctagaa ctccaatacg tccgagagaa gcacacatcc
     751  agatgaaagc agcagcactg cgtggcgcaa ataataattt gttcggcttg
     801  gatggtaacg tcggcacaac ggtagagaac acgggaaggc atacaaccga
     851  ggacgttaat cgggacatgc ataacttact tggcgttaag gggttatgaa
     901  gttgtatgcg agtagactat aagtatttaa gtttactcgt tagt