Sequence of DPV Potato virus Y

Potato virus Y polyprotein gene, partial cds.

ACC No: AF118153

Dated: 2004-04-29 | Length: 1426 | CRC: -1582819915

                !!NA_SEQUENCE 1.0
ID   AF118153   standard; genomic RNA; VRL; 1426 BP.
XX
AC   AF118153;
XX
SV   AF118153.1
XX
DT   12-APR-1999 (Rel. 59, Created)
DT   29-APR-2004 (Rel. 79, Last updated, Version 2)
XX
DE   Potato virus Y polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1426
RA   Bhat A.I., Varma A., Pappu H.R., Rajamannar M., Jain R.K., Praveen S.;
RT   "Characterization of a potyvirus from eggplant (Solanum melongena) as a
RT   strain of potato virus Y by N-terminal serology and sequence
RT   relationships";
RL   Plant Pathol. 48(5):648-654(1999).
XX
RN   [2]
RP   1-1426
RA   Pappu H.R., Pappu S.S., Bhat A.I.;
RT   ;
RL   Submitted (06-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Coastal Plain Experiment Station, University of Georgia,
RL   Moore Highway, Tifton, GA 31793, USA
XX
DR   GOA; Q9WG05.
DR   TrEMBL; Q9WG05; Q9WG05.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1426
FT                   /country="India"
FT                   /db_xref="taxon:12216"
FT                   /mol_type="genomic RNA"
FT                   /organism="Potato virus Y"
FT                   /strain="ordinary, O"
FT                   /specific_host="Solanum melongena"
FT   CDS             <1. .1098
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9WG05"
FT                   /db_xref="TrEMBL:Q9WG05"
FT                   /note="nuclear inclusion protein b and capsid protein"
FT                   /product="polyprotein"
FT                   /protein_id="AAD24563.1"
FT                   /translation="ARADLPEHRLEAICAAMIESWGYSELTHQIRRFYSWLLQQQPFAT
FT                   IAQEGKAPYIASMALRKLYMDRAVDEEELRAFTDMMVALDDEFEFDSYEVHHQANDTID
FT                   AGGSNKKDAKPEQGSIQSNPNKGKDKDVNAGTFGTHTVPRIKAITPKMRMPKSKGATVL
FT                   NLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGT
FT                   SPNVNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPR
FT                   YGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQ
FT                   EENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 1426 BP; 439 A; 267 C; 355 G; 365 T; 0 other;

  AF118153  Length: 1426  May 18, 2004 09:05  Type: N  Check: 9666  ..

       1  gcacgagcag acttgcccga acacaggctt gaggcgattt gcgcagctat
      51  gatagagtcc tggggttatt ctgaactaac acaccaaatc aggagattct
     101  actcatggtt attgcaacag caaccttttg caacaatagc gcaggaaggg
     151  aaggctcctt atatagcaag catggcatta aggaaactgt atatggatag
     201  ggctgtggat gaggaagagc taagagcctt cactgatatg atggtcgcat
     251  tagacgatga gtttgagttt gactcctatg aagtgcacca tcaagcaaat
     301  gacacaattg atgcaggagg aagcaacaag aaagatgcaa aaccagagca
     351  aggcagcatc cagtcaaacc cgaacaaagg aaaagataag gatgtgaatg
     401  ctggtacatt cgggacacat actgtgccga gaatcaaagc tatcacgccc
     451  aaaatgagaa tgcccaaaag caagggagca accgtgctaa atctagaaca
     501  cttgcttgag tacgctccac aacaaattga tatttcaaat actcgggcaa
     551  ctcaatcaca gtttgatacg tggtatgagg cagtgcggat ggcatacgac
     601  ataggagaaa ctgagatgcc aactgtgatg aatgggctta tggtttggtg
     651  cattgaaaat ggaacctcgc caaatgtcaa cggagtttgg gttatgatgg
     701  atgggaatga acaagttgag tacccgttga aaccaatcgt tgagaatgca
     751  aaaccaaccc ttaggcaaat catggcacat ttctcagatg ttgcagaagc
     801  gtatatagag atgcgcaaca aaaaggaacc gtatatgcca cgatatggtt
     851  taattcgaaa tctgcgggat gtgggtttag cgcgttatgc ctttgacttt
     901  tatgaggtca catcacgaac accagtgagg gctagggaag cgcacattca
     951  aatgaaggcc gcagcattga aatcagccca acctcgactt ttcgggttgg
    1001  acggtggcat cagtacacaa gaggagaaca cagagaggca caccaccgag
    1051  gatgtttctc caagtatgca tactctactt ggagtcaaga acatgtgatg
    1101  tagtgtctct ccagatgata tataagtatt tacatatgca gtaagtattt
    1151  tggcttttcc tgtactactt ttatcataat taataatcag tttgaatatt
    1201  actaatagat agaggtggca gggtgatttc gtcattgtgg tgactctatc
    1251  tgttaattcc gcattattaa gtcttagata aaagtgccgg gttgtcgttg
    1301  ttgtggatga ttcatcgatt aggtgatgtt gcgattctgt cgtagcagtg
    1351  actatgtctg gatctatctg cttgggtgat gttgtgattt cgtcataaca
    1401  gtgactgtaa acttcaatca ggagac