Sequence of DPV St Croix River virus
Saint Croix river virus segment 7 NS2 gene, complete cds.
ACC No: AF145404
Dated: 2001-04-16 | Length: 1463 | CRC: -2121494835
!!NA_SEQUENCE 1.0
ID AF145404 standard; RNA; VRL; 1463 BP.
XX
AC AF145404;
XX
SV AF145404.1
XX
DT 28-NOV-2000 (Rel. 66, Created)
DT 16-APR-2001 (Rel. 67, Last updated, Version 2)
XX
DE Saint Croix river virus segment 7 NS2 gene, complete cds.
XX
KW .
XX
OS Saint Croix river virus
OC Viruses; dsRNA viruses; Reoviridae; Orbivirus.
XX
RN [1]
RP 1-1463
RX PUBMED; 11257184.
RA Attoui H., Stirling J.M., Munderloh U.G., Billoir F., Brookes S.M.,
RA Burroughs J.N., de Micco P., Mertens P.P.C., de Lamballerie X.;
RT "Complete sequence characterization of the genome of the St Croix River
RT virus, a new orbivirus isolated from cells of Ixodes scapularis";
RL J. Gen. Virol. 82(Pt 4):795-804(2001).
XX
RN [2]
RP 1-1463
RA Attoui H., De Micco P., de Lamballerie X.;
RT ;
RL Submitted (26-APR-1999) to the EMBL/GenBank/DDBJ databases.
RL Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
RL Marseille 13005, France
XX
DR SPTREMBL; Q9DSP3; Q9DSP3.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1463
FT /chromosome="segment 7"
FT /db_xref="taxon:104581"
FT /organism="Saint Croix river virus"
FT CDS 36. .1424
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9DSP3"
FT /product="NS2"
FT /protein_id="AAG34263.1"
FT /translation="MSGAPSVRPEMWEPTSSSISVYLTLDASGDLFHPLLEKDSLTKIV
FT LKEGLVRFERPSQLTPRSTIAIVATFGNYVTTVGRNVHLYLCVDRTRLQVSLFPRGDTT
FT TPTSLCVPSTSRLVIPTSLILLELGASMLPRFATDRRHSIIRKRKSFSLFRSWLLSPRL
FT RFPQGEETLGVTCPQPESTLQLETLMEPEVREKDTPVRLSSKKGTVSLDNPLPPLRSLR
FT PPSPHLNDGDVERMSENIDKREKRKEKKEKKKKEKGHVSDHAPSSISLRPSSTSAAATD
FT DFLSDPFTPVEFPSSESVTPEPPRDFFDGEDLPARPSVTPTSQTSLHSEAHVTSISDSP
FT PFGFAHSSLPVPSKFTEMLKLRLSPSAPHHFGGDDLEFIPDLPQHLRAFAEKRGSSSPY
FT LITAQPTETIKDYNLYTFQAGPNASWVPVWEKNNEGAYVFKGRGPASLVHLAKRGGGVT
FT LFTT"
XX
SQ Sequence 1463 BP; 329 A; 429 C; 333 G; 372 T; 0 other;
AF145404 Length: 1463 December 21, 2001 14:53 Type: N Check: 544 ..
1 gtaatacaag tcagggttgg cttgaccgaa ccagaatgtc tggtgcacct
51 tccgttcgtc ccgaaatgtg ggaaccaact tcgagttcaa tatccgtgta
101 tctgactctc gacgcttcag gcgacctttt ccacccgctc ctggagaagg
151 attcccttac gaagatcgtc ttgaaggaag gtctcgtccg atttgaacgc
201 ccttcgcaac tcactcctcg ctcaaccatt gcgattgtcg cgacgtttgg
251 aaattacgtc acgacggttg gacgtaacgt gcatttgtat ctttgtgtcg
301 ataggacgag gcttcaggtt tcgctctttc ctagagggga tacaactaca
351 ccaacgtctc tgtgcgtccc ttcgacatcc aggctggtca tccctacctc
401 gctgatcctt ctggagctag gcgcgtctat gctgccacgc ttcgcgacgg
451 atcgccgcca ttctatcata agaaagagaa agtcgttctc cctcttccgt
501 tcctggctcc tgtcgcccag gctgagattt ccgcaaggcg aggagactct
551 cggcgtgacc tgcccgcaac cagagtccac ccttcagctc gaaactctca
601 tggagcctga ggttcgggag aaggacaccc cagtgagact ttcaagtaag
651 aaagggactg tatcccttga caatccgctt cctcctctca ggtcacttcg
701 ccctccctcc cctcacttga atgatggaga cgtggagagg atgagcgaaa
751 atattgacaa aagggaaaag aggaaggaga aaaaagagaa gaagaagaaa
801 gagaaggggc atgtttccga ccatgcccct tcgtccattt ctcttcgccc
851 ttcctccact tctgccgctg cgactgatga ttttctttcc gatccgttca
901 cgcctgtgga gtttccttca agcgaaagcg taactcctga acctcccagg
951 gatttcttcg acggcgagga ccttcccgct cgaccgtctg tgactccgac
1001 ctctcagacc tcccttcatt cagaagctca tgttacttcc atcagcgact
1051 cacctccttt cggattcgct cattcatctc ttcctgtacc ttcgaaattc
1101 accgaaatgc ttaaacttcg cctttcacct tccgcccccc accattttgg
1151 gggtgatgac ctggaattta ttccagattt gccacagcat cttcgagcct
1201 tcgctgagaa gcgcgggtca tcctctcctt atctcataac ggctcagccg
1251 acggaaacga ttaaagatta taatctctat actttccagg cagggcctaa
1301 tgcatcttgg gtccctgtat gggagaagaa caatgagggt gcctatgtat
1351 tcaaaggacg cggtcctgcc tcacttgtgc atctagccaa gcgaggtgga
1401 ggtgttaccc tattcacaac ttagtacgtg aagaacgtcc ctccaccgcc
1451 ctgataaaca tac