Sequence of DPV Soil-borne cereal mosaic virus
Soil-borne rye mosaic virus strain G RNA2 20K protein, 84K protein, and 18K protein genes, complete cds.
ACC No: AF146282
Dated: 1999-12-21 | Length: 3673 | CRC: -1137605293
!!NA_SEQUENCE 1.0
ID AF146282 standard; genomic RNA; VRL; 3673 BP.
XX
AC AF146282;
XX
SV AF146282.1
XX
DT 21-DEC-1999 (Rel. 62, Created)
DT 21-DEC-1999 (Rel. 62, Last updated, Version 1)
XX
DE Soil-borne rye mosaic virus strain G RNA2 20K protein, 84K protein, and
DE 18K protein genes, complete cds.
XX
KW .
XX
OS Soil-borne cereal mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
XX
RN [1]
RP 1-3673
RX MEDLINE; 20068741.
RX PUBMED; 10603167.
RA Koenig R., Pleij C.W.A., Huth W.;
RT "Molecular characterization of a new furovirus mainly infecting rye";
RL Arch. Virol. 144(11):2125-2140(1999).
XX
RN [2]
RP 1-3673
RA Koenig R.;
RT ;
RL Submitted (28-APR-1999) to the EMBL/GenBank/DDBJ databases.
RL Institut fuer Pflanzenvirologie, Biologische Bundesanstalt fuer Land-und
RL Forstwirtschaft, Messeweg 11, Braunschweig D38104, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .3673
FT /chromosome="RNA2"
FT /db_xref="taxon:100887"
FT /mol_type="genomic RNA"
FT /organism="Soil-borne cereal mosaic virus"
FT /strain="G"
FT CDS 330. .2585
FT /codon_start=1
FT /db_xref="GOA:Q9JAD0"
FT /db_xref="UniProt/TrEMBL:Q9JAD0"
FT /note="coat protein; ORF2; readthrough protein"
FT /transl_except=(pos:858. .860,aa:OTHER)
FT /product="84K protein"
FT /protein_id="AAF18339.1"
FT /translation="MAVKNGYTGYNKELNLMASIHPFIRLSTLISQVEGWQATRASILT
FT HLGVMLNGVSKLGERNFFSRQKRFGTHTQDGDEIFCDLGGEAVMQVITRLTVSLQSAKG
FT EGSQTRNAKRGTAPTTNQVEGEEQGQTDQTLAISNALAEFMTFIHTKDFTMNECYTQDS
FT FEAKFNLKWEGTSXRDSVSGKLRTQVVEDFQNRLVLADDLGIFPRRNISGEVIREEPEI
FT IYAELEDKLLSFECSVYHPKAVTTETEVSVLPSLQADLETGVGLEDIETTIVTEVLIDE
FT ESSYFWLYLIFLLLSTFISCFIVLSRSFIHYLGNRGGRGGPFFRKVATTLWNVRLWLLR
FT KAARRYGSLGIVRKRHTRAGMRKYLRDYNFQLDEWESAVDCAPSEALIVADQRMFVRAV
FT NKVVDLEGDFDTIENVKKTFASYKVRNYKVEKWLDKHTIRSALVVLNDVVKEDTLTLGE
FT GMLSLESATFEDVLECNVEAQRNGMYFKDVIALQFAFRLIGTPEFSDFVIAYKGTLYPC
FT YVDAIRRHSLLLEKHHVDEDQKRKNEKALEWLLMAGQGAFVLSAVVTAGVTAFKIHKWI
FT KSRMLLRALQMLPSVGEGGNDGGGGFSEEALQRFANGRNFEERLAALHTGLDMTATNLE
FT SFSPEDMRVEIQHVIQAHVEGSYHAADLPFLGDVTPSGVSDVVLSSAISSDVSSVDTSI
FT SLGVASHARRRAVASNTRMYPSVGNVSYGNFKSPRVSGKSGIGGMKMKIASRPMLAS"
FT CDS 330. .860
FT /codon_start=1
FT /db_xref="GOA:Q9Q9Q2"
FT /db_xref="UniProt/TrEMBL:Q9Q9Q2"
FT /note="coat protein; ORF1"
FT /product="20K protein"
FT /protein_id="AAF18338.1"
FT /translation="MAVKNGYTGYNKELNLMASIHPFIRLSTLISQVEGWQATRASILT
FT HLGVMLNGVSKLGERNFFSRQKRFGTHTQDGDEIFCDLGGEAVMQVITRLTVSLQSAKG
FT EGSQTRNAKRGTAPTTNQVEGEEQGQTDQTLAISNALAEFMTFIHTKDFTMNECYTQDS
FT FEAKFNLKWEGTS"
FT CDS 2655. .3152
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q9Q9Q1"
FT /note="cysteine-rich protein; ORF3"
FT /product="18K protein"
FT /protein_id="AAF18340.1"
FT /translation="MSACVFHSCDKCVDGPKNVVCVSKYRHSVYKVLGLSVVKCRLPAD
FT CGVNCGMPAAFVLEDGHPRLTLDGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGE
FT FLKTQIRVLSETANANTAPVYAPKKINRMKAEVQDVNVKIQDRSTALAGVMDAVALNLS
FT PK"
XX
SQ Sequence 3673 BP; 970 A; 648 C; 958 G; 1097 T; 0 other;
AF146282 Length: 3673 June 22, 2004 14:38 Type: N Check: 4848 ..
1 gaaaatttat tatcacatta cgttgagtgt taactcttct tgtgaaatta
51 cctttcttac caggataaga aataaaatat tttctgggtt atcattatct
101 cgatacttag cagagattaa catctcgctg ctctaggcct gctttgcaat
151 aaatcctagg tagtcagctg ttagcgtgtg acgttgaagg gtagtggtat
201 ttgggttcgc tggataagtt aacgagactt aaaggtgagg ttgataggtc
251 cttacaaaag gctgcggaca aggtgactgc tgaaagtacc gaaccgttac
301 aatctagagt ggttgtgcag ttacctccga tggctgtcaa gaacggatac
351 acgggttaca acaaggagtt gaatttgatg gcttctattc atcctttcat
401 taggctgagt actttgataa gtcaggttga aggatggcaa gcgacacgag
451 ctagcatact tactcattta ggtgtaatgc tcaacggtgt tagtaagtta
501 ggtgaaagaa actttttctc aagacagaaa aggtttggaa cgcacactca
551 ggacggtgac gagattttct gtgatctcgg tggtgaagca gttatgcagg
601 tcatcaccag acttacggta tctctgcaat ccgcaaaggg tgaaggttcg
651 cagacccgga atgcgaaaag aggaacggcg cctactacta atcaggttga
701 gggtgaggaa cagggtcaga ctgatcagac gttagccatt tcgaatgcgt
751 tggctgaatt tatgactttc atccacacta aagatttcac gatgaacgag
801 tgttacacgc aagactcttt tgaggctaaa ttcaatctga aatgggaagg
851 tactagttga cgggacagcg tctcgggaaa attgagaact caggtcgtcg
901 aagacttcca gaataggctg gtgttggcag acgatttggg tattttcccg
951 agacgcaata tcagtggtga ggtgataaga gaagagcctg aaataatcta
1001 tgcggagctt gaggataaac ttttgagttt tgagtgctct gtgtaccatc
1051 ctaaggctgt gactactgag actgaggtgt ctgttttgcc gagtttgcaa
1101 gcggatctgg agacaggtgt cggtttggag gatattgaaa cgaccattgt
1151 tactgaggta ctcattgacg aggagagcag ttacttttgg ttatatctta
1201 tattccttct attatcgact tttatatcgt gcttcattgt actgtcgcga
1251 tcctttattc actatctcgg gaatagaggt ggccgcggcg gtccattctt
1301 tcgaaaggtc gctactacat tgtggaatgt gaggctgtgg ctgctgagga
1351 aagcggctag acgttacggt tcccttggta tagtaaggaa gcgtcacacg
1401 cgcgctggca tgcgcaagta cttgcgtgac tataacttcc aacttgacga
1451 atgggaaagt gctgttgact gcgccccaag tgaggctttg attgttgcag
1501 atcagagaat gtttgtgagg gcagtgaata aggttgtgga tctcgagggc
1551 gattttgaca ctattgaaaa tgttaagaag actttcgcaa gctacaaagt
1601 gcgcaattac aaagttgaga agtggttaga caaacataca atacgttcag
1651 cccttgttgt tctgaacgat gttgtaaaag aagatactct cactttaggc
1701 gaaggtatgc tatcattaga aagcgcgact tttgaagacg tactggagtg
1751 taatgttgaa gctcaacgaa atggcatgta ctttaaggac gtaattgcct
1801 tgcagtttgc ttttcgtctg ataggcacac cagagttctc cgattttgtg
1851 atagcttaca agggcacttt gtacccttgt tatgttgatg caattaggag
1901 acacagtttg cttcttgaga aacaccatgt tgatgaggat caaaagagaa
1951 aaaacgagaa agctttggaa tggctgctta tggcaggaca aggtgctttc
2001 gtattgtctg ctgttgtgac agctggtgtt acagcgttta aaatccacaa
2051 gtggataaaa agtcgtatgc ttctaagagc tttgcaaatg ttaccgtctg
2101 ttggtgaagg cggtaacgat ggcggaggag gtttctctga agaggctctt
2151 caaagatttg ctaatggtcg taacttcgaa gagcggcttg ctgcgttaca
2201 tactggtttg gatatgactg cgacaaatct ggagagtttt tctccagaag
2251 acatgcgtgt tgaaatccag cacgttatcc aagctcacgt tgaaggttct
2301 taccatgctg ctgatcttcc ctttttggga gatgttacac ccagcggtgt
2351 ttctgatgtt gtgctttcta gtgctattag tagcgatgtg agtagtgttg
2401 acacgtctat ttcattaggc gtggcgagtc atgcgaggcg tcgtgctgtt
2451 gctagtaaca caaggatgta tcctagtgtc ggtaatgtta gttacggtaa
2501 ctttaagtca ccgagagtta gtggtaaaag tggaattggt ggtatgaaaa
2551 tgaaaatcgc tagtaggcct atgttggcgt cctagtgtgt tgtttttaaa
2601 aatacgtgtt cacaccgcta ctgctggact ttctcggttt ttcttcctaa
2651 cattatgtcg gcttgcgttt ttcactcttg tgataagtgt gttgatggac
2701 ccaagaacgt tgtatgtgtt agtaaatacc gtcatagtgt ttataaggtt
2751 ttgggtcttt ctgtcgttaa gtgtcgtctt cctgcagatt gcggtgttaa
2801 ttgtggtatg cctgcagctt ttgttctcga agatgggcat cctaggctaa
2851 ctcttgatgg ttactgtggt gagaaacaca aaggttatgt gatttctggt
2901 gcttggcgac atgcgcaact tcgtacttta aacgatgaac ttgacaagtt
2951 ggagaagagg ggagagtttt tgaaaactca gataagagtg ctcagtgaaa
3001 ctgctaatgc taacactgct cctgtatatg ctcccaagaa gattaatcgt
3051 atgaaggcgg aggttcagga tgttaatgta aaaattcagg accgtagtac
3101 tgctcttgca ggtgtcatgg atgctgtcgc attgaattta tcaccgaaat
3151 agttctccac ggaagtgtga agccatatga tgagtacgtt aacactgtat
3201 ttacaactgg tatgtgtgta tactggaata ggtaaccagg ataaagaaac
3251 ctagcgaaaa tatcctacca aaacaatacg tattgtggct ttgttgtgtg
3301 gtttattttg cttatattgc tatgttgtat gtgtgtgttg aaaatagtct
3351 aacttgtcgg gcagagacaa gtcgtttccg tcacgataga cggagccgct
3401 gggattgcgg attataaatc gaacaagcct atttgtacgg gtcgagtaca
3451 aacgtggcca tcacgataga tggttctgtt tttcgaacag atgtaaatcg
3501 aaggcgtcgt gcagtacggt aaactgcaca tctatcctct agtttctatt
3551 gatgtaattg aaaaaagatc aatattttac gatgatgagg agcgactggt
3601 ggtcgcggta gctttgacac agctactaag aggggttcaa atcccccccc
3651 gaaccggagg gttatccggc cca