Sequence of DPV Plum pox virus

Plum pox virus isolate 3.3 RB/GF-Mp31GF-Nb coat protein mRNA, partial cds.

ACC No: AF172350

Dated: 1999-10-18 | Length: 990 | CRC: 466462709

                !!NA_SEQUENCE 1.0
ID   AF172350   standard; RNA; VRL; 990 BP.
XX
AC   AF172350;
XX
SV   AF172350.1
XX
DT   18-OCT-1999 (Rel. 61, Created)
DT   18-OCT-1999 (Rel. 61, Last updated, Version 1)
XX
DE   Plum pox virus isolate 3.3 RB/GF-Mp31GF-Nb coat protein mRNA, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-990
RA   Asensio M., Saenz P., Garcia J.A., Cambra M.;
RT   "Segregation of PPV isolates by mechanical and aphid transmission";
RL   Unpublished.
XX
RN   [2]
RP   1-990
RA   Asensio M., Saenz P., Garcia J.A., Cambra M.;
RT   ;
RL   Submitted (27-JUL-1999) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection and Biotechnology, Instituto Valenciano de Investigaciones
RL   Agrarias (IVIA), Carretera Moncada-Naquera km 4,5, Moncada Valencia 46113,
RL   Spain
XX
DR   SPTREMBL; Q9PYE5; Q9PYE5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .990
FT                   /db_xref="taxon:12211"
FT                   /note="isolate segregated from 3.3 RB/GF by aphid
FT                   transmission to GF (indicator plant : peach seedling) and
FT                   mechanical transmission to Nicotiana benthamiana"
FT                   /organism="Plum pox virus"
FT                   /strain="PPV-D"
FT                   /isolate="3.3 RB/GF-Mp31GF-Nb"
FT                   /specific_host="Japanese plum"
FT   CDS             <1. .>990
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9PYE5"
FT                   /product="coat protein"
FT                   /protein_id="AAF02623.1"
FT                   /translation="ADEREDEEEVDAGKPVVVTAPAATSPILQPPPVIQPAPRTTAPML
FT                   NPIFTPATTQPATKPVSQVSGPQLQTFGTYGNEDASPSNSNALVNTNRDRDVDAGSIGT
FT                   FTVPRLKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRD
FT                   YDVTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQI
FT                   MAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHI
FT                   QMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGVRGV"
XX
SQ   Sequence 990 BP; 316 A; 221 C; 236 G; 217 T; 0 other;

AF172350  Length: 990  December 21, 2001 14:54  Type: N  Check: 4249  ..

       1  gctgacgaaa gagaagacga ggaggaagtt gatgcaggca agccggttgt
      51  agtcactgca ccggcagcaa ctagcccaat acttcaacca cctccagtca
     101  tacagcctgc accccggact acggcgccaa tgctcaaccc cattttcacg
     151  ccagcaacaa ctcaaccagc aacaaaacca gtttcacagg tgtcaggacc
     201  tcaactgcaa acttttggaa catatggtaa cgaggatgca tcacctagca
     251  actcaaacgc gctagtcaac acaaacagag acagggacgt cgatgcagga
     301  tcaattggaa cttttacagt gccacgtttg aaggcaatga cttcgaaact
     351  atctctgcca aaggtgaagg gaaaggctat tatgaacttg aaccatttgg
     401  cacattatag tcctgcacag gttgacttgt ccaacacgag agctccgcag
     451  tcttgtttcc aaacttggta tgaaggagtt aagcgagatt atgatgtcac
     501  ggacgatgaa atgagcatca ttttaaatgg tcttatggtt tggtgcatag
     551  agaatggaac atccccgaat atcaatggaa tgtgggtgat gatggatggg
     601  gaaacacaag tggagtatcc aataaagcca ttgttggatc atgcgaaacc
     651  cacttttaga caaattatgg cacatttcag taacgtggct gaagcgtata
     701  ttgaaaaacg aaattatgaa aaagcataca tgccaaggta tggaattcag
     751  cgcaacctga cagactacag cctcgccaga tatgcctttg atttttacga
     801  aatgacttca acgacacccg tacgggcacg tgaagctcat atccagatga
     851  aggcagcagc attgagaaat gttcaaaatc gtttatttgg cttggatgga
     901  aacgtcggaa cacaagaaga ggacacagag agacacaccg ctggtgatgt
     951  taatcgcaac atgcacaacc tcctcggtgt gaggggagtg