Sequence of DPV Rotavirus B

Human rotavirus B strain CAL outer capsid protein VP7 gene, complete cds.

ACC No: AF184083

Dated: 2001-10-15 | Length: 814 | CRC: 300231013

                !!NA_SEQUENCE 1.0
ID   AF184083   standard; RNA; VRL; 814 BP.
XX
AC   AF184083;
XX
SV   AF184083.1
XX
DT   02-OCT-2000 (Rel. 65, Created)
DT   15-OCT-2001 (Rel. 69, Last updated, Version 3)
XX
DE   Human rotavirus B strain CAL outer capsid protein VP7 gene, complete cds.
XX
KW   .
XX
OS   Human rotavirus B strain CAL
OC   Viruses; dsRNA viruses; Reoviridae; Rotavirus; Group B rotaviruses;
OC   Human rotavirus B.
XX
RN   [1]
RP   1-814
RX   MEDLINE; 21080727.
RX   PUBMED; 11213100.
RA   Sen A., Kobayashi N., Das S., Krishnan T., Bhattacharya S.K., Naik T.N.;
RT   "The evolution of human group B rotaviruses";
RL   Lancet 357(9251):198-199(2001).
XX
RN   [2]
RP   1-814
RX   MEDLINE; 21361486.
RX   PUBMED; 11468747.
RA   Kobayashi N., Naik T.N., Kusuhara Y., Krishnan T., Sen A.,
RA   Bhattacharya S.K., Taniguchi K., Alam M.M., Urasawa T., Urasawa S.;
RT   "Sequence analysis of genes encoding structural and nonstructural proteins
RT   of a human group B rotavirus detected in Calcutta, India";
RL   J. Med. Virol. 64(4):583-588(2001).
XX
RN   [3]
RP   1-814
RA   Kobayashi N., Naik T.N.;
RT   ;
RL   Submitted (04-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL   Hygiene, Sapporo Medical University School of Medicine, S-1 W-17, Chuo-ku,
RL   Sapporo, Hokkaido 060-8556, Japan
XX
DR   SPTREMBL; Q9E8I9; Q9E8I9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .814
FT                   /db_xref="taxon:106330"
FT                   /organism="Human rotavirus B strain CAL"
FT                   /strain="CAL"
FT   CDS             10. .759
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9E8I9"
FT                   /product="outer capsid protein VP7"
FT                   /protein_id="AAG16960.1"
FT                   /translation="MASLPLLVLAAAVDAQLNIVPSVHPEVCVLYADDHQSDANKFNGN
FT                   FTQIFHSYNSITLSFMSYSSSSYDVIDIISRYDLSSCSILAIDVFNASMDFNVFLQSTN
FT                   NCSKYNANKIHHIKLPRGEEWFSYSKNLKFCPLSDSLIGMYCDTQLSDTYFEISTGGTY
FT                   EVTDVPEFTQMGYTFHSSEDFYLCHRISSEAWLNYHLFYRDYDVSGVISKQISWGNVWS
FT                   GFKTFAQVLYKILDLFFNSKRNVEPRA"
XX
SQ   Sequence 814 BP; 247 A; 144 C; 149 G; 274 T; 0 other;

AF184083  Length: 814  December 21, 2001 14:54  Type: N  Check: 5470  ..

       1  ggcaataaaa tggcttcatt gccgcttctc gtccttgctg ctgcggtcga
      51  tgctcaactc aacattgttc cttctgtaca tcctgaagtg tgtgtgcttt
     101  atgctgatga ccatcaatct gatgcgaata agtttaatgg taattttact
     151  caaatattcc attcatacaa ctcaataacg ctatcattca tgagctattc
     201  ttcttcatct tatgatgtaa ttgacataat atctagatat gatctcagtt
     251  cttgtagtat attagctatc gatgtattta acgcttctat ggattttaat
     301  gtttttcttc agtccactaa caattgttca aaatataacg ctaataagat
     351  tcaccatatc aaattgcctc gtggagaaga gtggttttca tattcaaaga
     401  atctaaagtt ttgtccttta tccgattctt taataggaat gtattgtgat
     451  actcaacttt ctgatactta cttcgaaata tccactggcg gaacgtacga
     501  agttacagac gtacctgaat tcactcagat gggatacaca ttccattcaa
     551  gtgaggattt ttatttgtgc cacagaattt ctagtgaagc ttggttgaac
     601  tatcatttat tttatagaga ctatgatgta tctggagtca taagtaaaca
     651  aataagctgg ggaaatgtat ggtcgggttt taaaaccttt gcgcaagttt
     701  tatataaaat attagatcta ttttttaaca gtaagaggaa cgttgaaccg
     751  cgtgcataaa gaggactagg cgaaagggag ggaaccaaac gactagccga
     801  agctgtaaaa accc