Sequence of DPV Ornithogalum mosaic virus

Pterostylis virus Y isolate Pterostylis polyprotein gene, partial cds.

ACC No: AF185964

Dated: 2000-08-07 | Length: 1603 | CRC: -1781470496

                !!NA_SEQUENCE 1.0
ID   AF185964   standard; RNA; VRL; 1603 BP.
XX
AC   AF185964;
XX
SV   AF185964.1
XX
DT   06-OCT-1999 (Rel. 61, Created)
DT   07-AUG-2000 (Rel. 64, Last updated, Version 3)
XX
DE   Pterostylis virus Y isolate Pterostylis polyprotein gene, partial cds.
XX
KW   .
XX
OS   Pterostylis virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1603
RA   Gibbs A., Mackenzie A., Blanchfield A., Cross P., Wilson C., Kitajima E.,
RA   Nightingale M., Clements M.;
RT   "Viruses of orchids in Australia: their identification, biology and
RT   control";
RL   Aust. Orchid Rev. 65(3):10-21(2000).
XX
RN   [2]
RP   1-1603
RA   Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (13-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra, ACT 2601, Australia
XX
DR   SPTREMBL; Q9QDK9; Q9QDK9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1603
FT                   /country="Australia"
FT                   /db_xref="taxon:104391"
FT                   /note="acronym: PtVY"
FT                   /organism="Pterostylis virus Y"
FT                   /isolate="Pterostylis"
FT                   /specific_host="Pterostylis coccinae"
FT   CDS             <1. .1398
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9QDK9"
FT                   /note="NIb polymerase/coat protein"
FT                   /product="polyprotein"
FT                   /protein_id="AAF00526.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMNYSLAKLDIPFEAMDSRIRYFANG
FT                   DDLIIAVNPIGGEHILDSLRDSFSELGLNYDFNDRTYSKEQLSFMSHQALWDRDMYIPK
FT                   IKAERVVSILEWDRSVLPEHRIEAICAAMIEAWGFPNLLQEIRKFYAYMVTQEPYSALH
FT                   AQGQTRYISEQALITLYKDRKVILNDIEPYLQKLAEISLESDEEEVWHQAESMDAGGSG
FT                   RQQDSVARQQDKDVNVGTFSVARVKQISDKMMLPKVRGKAVLNLQHLIQYSPEQTEISN
FT                   TRAIRTQFDHWYDKVRESYGVIDEQMSVILNGLMVWCIENGTSPNLQGSWTMMDGEEQV
FT                   EYPLQPVLENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGSQRNLNDYSLARYAF
FT                   DFYEMTSRTPNRAREAHIQMKAAALRNTKTKLFGLDGKVGTGEEDTERHTASDVRRDMH
FT                   SLLGVSM"
FT   3'UTR           1399. .>1603
XX
SQ   Sequence 1603 BP; 493 A; 286 C; 403 G; 421 T; 0 other;

AF185964  Length: 1603  December 21, 2001 14:54  Type: N  Check: 8989  ..

       1  gggaataata gcgggcaacc gtcgacagtt gttgacaaca cattgatggt
      51  ggttttggca atgaactatt ctctcgcgaa actggacatc ccattcgaag
     101  cgatggatag taggatacgt tactttgcta atggtgacga tttaataatt
     151  gcagtcaatc cgattggagg agaacacatt ttagattcct tacgagattc
     201  attttcggag ctagggttga actacgactt taacgatcgc acatacagta
     251  aggaacaatt gagctttatg tcccatcaag ctctgtggga tagggacatg
     301  tacataccca aaataaaggc agagcgagtg gtatctattt tggaatggga
     351  cagaagtgta cttcctgaac accgaattga ggcaatctgc gctgccatga
     401  ttgaagcatg gggctttcct aacttgctgc aagagattag gaagttttac
     451  gcttatatgg tgacacagga accatatagt gccctacatg cacaggggca
     501  aacgagatat atttctgagc aagccctgat aacgctttac aaggaccgaa
     551  aggtaattct taatgatata gaaccttatc ttcaaaaatt ggcagagata
     601  tcattagaat cggatgaaga ggaagtttgg catcaggcgg aatccatgga
     651  cgctggcggt tctggtcgac aacaggatag tgttgcgcga caacaagaca
     701  aggacgttaa tgttggaacg ttctctgtag cacgagtgaa gcaaatcagc
     751  gacaagatga tgctaccaaa agtgcgagga aaggcagttc tcaatctgca
     801  gcaccttatc caatatagcc ctgagcaaac agaaatttca aacacaaggg
     851  cgattcgcac acaatttgac cattggtatg ataaggtaag agaaagttat
     901  ggtgtaattg atgagcagat gtcagttata ctaaacggct taatggtttg
     951  gtgcatcgaa aacgggacgt caccaaattt acaaggcagt tggactatga
    1001  tggatggaga ggaacaggtt gaatatccat tgcagccagt acttgagaat
    1051  gcgcaaccaa cttttcgaca aattatggcg catttctcaa acgcagccga
    1101  ggcgtatatt gagaaaagaa actcggaaca aaggtacatg ccaaggtatg
    1151  gcagtcaacg aaatctgaac gactacagtt tagctcgcta tgcatttgac
    1201  ttttatgaga tgacatctcg aactcctaac agggcgcgag aagcacatat
    1251  acaaatgaaa gcggcggctc ttcgaaacac caagacgaag ttgtttggtt
    1301  tggatggaaa agtgggtacc ggagaagagg acacggaacg gcacacggca
    1351  agcgatgttc gtcgtgacat gcattcactg ctaggtgtta gtatgtgatt
    1401  tagtgaaggt ggattagttt aataataaga taatttactc cgttagcatc
    1451  ccttcttttg aattatgcgt agtaattgtt catgtcagtg accaacacag
    1501  tcaagtattg ggttgggtga tgatgcgagc gagtattagt gtgtgatttc
    1551  gaacttatta ttgttgtatt gtgattgcta aatagggtga ttgttttagt
    1601  ttc