Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate H1K coat protein gene, partial cds.

ACC No: AF196839

Dated: 2000-01-17 | Length: 1022 | CRC: -345288073

                !!NA_SEQUENCE 1.0
ID   AF196839   standard; RNA; VRL; 1022 BP.
XX
AC   AF196839;
XX
SV   AF196839.1
XX
DT   17-JAN-2000 (Rel. 62, Created)
DT   17-JAN-2000 (Rel. 62, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate H1K coat protein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1022
RA   Davis M.J., Ying Z.;
RT   "Genetic Diversity of the Papaya Ringspot Virus in Florida";
RL   Proc. Annu. Meet. Fla. State Hort. Soc. 0:0-0(2000).
XX
RN   [2]
RP   1-1022
RA   Davis M.J., Ying Z.;
RT   ;
RL   Submitted (20-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL   TREC, University of Florida, IFAS, 18905 SW 280 Street, Homestead, FL
RL   33031, USA
XX
DR   SPTREMBL; Q9Q6P3; Q9Q6P3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1022
FT                   /country="USA: Florida"
FT                   /db_xref="taxon:12205"
FT                   /note="type: P"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="H1K"
FT   CDS             <1. .879
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9Q6P3"
FT                   /product="coat protein"
FT                   /protein_id="AAF25201.1"
FT                   /translation="NTHVFHQSKNEAVDAGLNEKLKEKEKQKEKEKEKQKEKDDASDGN
FT                   DVSTSTKTGERDRDVNVGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQI
FT                   DISNTRATQSQFEKWYEGVRSDYGLNDNEMQVTLNGLMVWCIENGTSPDISGVWVMMDG
FT                   ETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLA
FT                   RYAFDFYEVNSKTPDRAREAHMQMKAAALRNASRRMFGMDGSVSNKEENTERHTVEDVN
FT                   RDMHSLLGMRN"
XX
SQ   Sequence 1022 BP; 330 A; 182 C; 247 G; 263 T; 0 other;

AF196839  Length: 1022  December 21, 2001 14:55  Type: N  Check: 710  ..

       1  aatacgcatg tgtttcacca gtccaaaaat gaagctgtgg atgctggttt
      51  gaatgaaaag ctcaaagaaa aagaaaaaca gaaagaaaaa gaaaaagaaa
     101  aacaaaaaga aaaagacgat gctagtgacg gaaatgatgt gtcgactagc
     151  acaaaaactg gagagagaga tagagatgtc aatgttggga ccagtggaac
     201  tttcactgtt ccgagaatta aatcattcac tgataagatg attttaccga
     251  gaattaaggg aaagactgtc cttaatttga atcatcttct tcagtataat
     301  ccgcaacaaa ttgacatttc taacactcgt gccactcagt cacaatttga
     351  gaaatggtat gagggagtga ggagtgatta tggcctgaat gataatgaga
     401  tgcaagtgac gctaaatggc ttgatggttt ggtgtatcga gaatggtaca
     451  tctccagaca tatctggtgt ctgggttatg atggatgggg aaacccaagt
     501  tgattatcca atcaagcctt tgattgagca tgctactccg tcatttaggc
     551  aaattatggc tcactttagt aacgcggcag aagcatacat tgcgaaaaga
     601  aatgccactg agaggtacat gccgcggtat ggaatcaaga ggaatttgac
     651  tgacattagc ctcgccagat acgctttcga tttctatgag gtaaattcga
     701  aaacacctga tagagctcgc gaagctcaca tgcagatgaa agctgcagca
     751  ctgcgaaatg ctagtcgcag aatgtttggt atggacggca gtgttagtaa
     801  caaggaagaa aacacggaga gacacacagt ggaagatgtc aatagagaca
     851  tgcactctct cctgggtatg cgcaactgaa tactcgcgct tgtgtgtttg
     901  tcgagcctgg ctcgaccctg tttcacctta tagtactata taagttttag
     951  aatacagtgt ggctgtgcca ccgcttctat tttatagtga gggtagccct
    1001  ccgtgctttt agtattattc ga