Sequence of DPV Soybean mosaic virus

Soybean mosaic virus VA1 P1 protease gene, partial cds.

ACC No: AF200576

Dated: 1999-11-30 | Length: 939 | CRC: 1388071195

                !!NA_SEQUENCE 1.0
ID   AF200576   standard; RNA; VRL; 939 BP.
XX
AC   AF200576;
XX
SV   AF200576.1
XX
DT   30-NOV-1999 (Rel. 61, Created)
DT   30-NOV-1999 (Rel. 61, Last updated, Version 1)
XX
DE   Soybean mosaic virus VA1 P1 protease gene, partial cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-939
RA   Latorre I.J., Domier L.L., Hartman G.L.;
RT   "Natural variability of soybean mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-939
RA   Latorre I.J., Domier L.L., Hartman G.L.;
RT   ;
RL   Submitted (01-NOV-1999) to the EMBL/GenBank/DDBJ databases.
RL   USDA-ARS, Department of Crop Sciences, University of Illinois, 1102 S.
RL   Goodwin Ave., Urbana, IL 61801, USA
XX
DR   SPTREMBL; Q9PYG1; Q9PYG1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .939
FT                   /db_xref="taxon:12222"
FT                   /virion
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="VA1"
FT   CDS             13. .>939
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9PYG1"
FT                   /product="P1 protease"
FT                   /protein_id="AAF13986.1"
FT                   /translation="MATIMIGSMAISVPNTHIFCASNSGMPVQASQMAKQVPSTRGVLY
FT                   TLKREGNTQVHKHEEALRKFQEAFDQDVSIQRRLLVNKHSSIQSTKKNGLTLRRLTLEQ
FT                   ARAKEAAIARRKQEEEDFLNGNYEQQFHAGVSTTKSMKFGGGSVGFRTKYWRPTPKKTK
FT                   ERRATSQCRKPTYVLEEVLSIASKSGKLVEFITGGKGKRVKVCYVRKHGAILPKFSLPH
FT                   EEGKYIHQEIQYASTYELLPYICMFAKYKSISANDITYGDSGLLFDERSSLTTNHTKLP
FT                   YFVVRGRKNGKLVNALEVVENMEDIQHY"
XX
SQ   Sequence 939 BP; 311 A; 170 C; 225 G; 233 T; 0 other;

AF200576  Length: 939  December 21, 2001 14:55  Type: N  Check: 3593  ..

       1  acagcaagtt aaatggcaac aatcatgatt ggaagcatgg cgatttctgt
      51  gccaaacact cacatcttct gcgcatcgaa ttctgggatg ccagttcagg
     101  caagtcagat ggcgaaacaa gtgccttcta ctcgaggggt gttatacaca
     151  ctaaaaagag agggcaacac gcaagtgcat aagcatgagg aggcactgcg
     201  taaatttcaa gaagcattcg accaagatgt tagcattcag cgaaggcttc
     251  tggtaaataa gcatagttcc atacaatcca caaagaagaa tggtttaacc
     301  ttgcgtcgct taactttaga gcaggctcga gcaaaagaag cggcaattgc
     351  aaggcgaaag caagaagagg aagactttct caatgggaat tatgaacagc
     401  aatttcatgc tggtgtttcc actacaaagt ccatgaagtt tggaggaggg
     451  agtgttgggt tcagaacaaa atactggaga ccaactccaa agaagactaa
     501  agaaaggcgt gcgacatcac agtgtaggaa accaacatat gttttggagg
     551  aagttctttc tatagcttca aagagtggta agctggttga atttatcaca
     601  ggaggtaaag gaaagagagt caaagtctgc tatgtgcgta agcatggcgc
     651  aattttgccc aaattctctc tcccgcatga agaaggtaaa tatatccatc
     701  aggagattca gtatgcaagc acatatgagc ttcttcctta tatttgcatg
     751  tttgcaaaat ataagagcat aagtgcgaat gatataactt atggagatag
     801  tggtttactg tttgatgagc gatcatcttt aaccacaaat cacactaagt
     851  taccatactt tgttgttcga ggaaggaaga atgggaagct tgtcaacgct
     901  cttgaagtgg ttgaaaacat ggaggatatt cagcactac