Sequence of DPV Apium virus Y

Apium virus Y ApVY-Qld polyprotein gene, partial cds.

ACC No: AF203529

Dated: 2002-11-30 | Length: 1708 | CRC: -813484707

                !!NA_SEQUENCE 1.0
ID   AF203529   standard; RNA; VRL; 1708 BP.
XX
AC   AF203529;
XX
SV   AF203529.1
XX
DT   06-JUL-2000 (Rel. 64, Created)
DT   30-NOV-2002 (Rel. 73, Last updated, Version 4)
XX
DE   Apium virus Y ApVY-Qld polyprotein gene, partial cds.
XX
KW   .
XX
OS   Apium virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1708
RA   Moran J., van Rijswijk B., Traicevski V., Kitajima E.W., Mackenzie A.M.,
RA   Gibbs A.J.;
RT   "Potyviruses, novel and known, in cultivated and wild species of the family
RT   Apiaceae in Australia";
RL   Arch. Virol. 147(10):1855-1867(2002).
XX
RN   [2]
RP   1-1708
RA   Mackenzie A., Gibbs A.;
RT   ;
RL   Submitted (12-NOV-1999) to the EMBL/GenBank/DDBJ databases.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra 2601, Australia
XX
DR   GOA; Q9ILZ3; Q9ILZ3.
DR   SPTREMBL; Q9ILZ3; Q9ILZ3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1708
FT                   /country="Australia: Queensland"
FT                   /db_xref="taxon:168135"
FT                   /note="ApVY-Qld: parsley isolate"
FT                   /organism="Apium virus Y"
FT   CDS             <1. .1455
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9ILZ3"
FT                   /db_xref="SPTREMBL:Q9ILZ3"
FT                   /note="contains partial NIb polymerase and complete coat
FT                   protein sequence"
FT                   /product="polyprotein"
FT                   /protein_id="AAF80961.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMTYSLSKLGYVGEDQANVCRYLVNG
FT                   DDLLIALHPDHEHIAAKLSDLFRQLGLKYTFESKTKDKSELWFMSHRGVQIDGMYIPKL
FT                   EEERIVSILEWDRSTEPEHRLEAICAAMVESWGYEWLTHEIRKFYNWVLDQEPYNEIAR
FT                   QGKAPYIAEMALKKLYTSKDVSDNELMHFVSEFLKMENLYDEDLCVYHQGDNVLDAGND
FT                   KQDKNKGSIVPSGSGTEKGQIQSAPDKDINAGTPGIYAVPKLKAISNKMRVPKYKNKNS
FT                   MNLSFLLTYLPDQIDISNRRATHSQYDAWFEGVKKDYDVSDAEMEILLSGLMVWCLENG
FT                   TSPDLSGTWTMMDGEEQREYPIKPLIEHAKPTFRQIMHHFSDVAVAYIEMRNTKGPYMP
FT                   GYGLKRNLRDRSLACYAFDFYEMTSKSPERAKEAHLQMKAASLKNSRTKVFGLDGSVSS
FT                   KEEDPERHTVEDVNRDMHTLLGMRGV"
FT   3'UTR           1456. .1708
XX
SQ   Sequence 1708 BP; 567 A; 306 C; 389 G; 446 T; 0 other;

AF203529  Length: 1708  January 14, 2003 14:19  Type: N  Check: 1718  ..

       1  gggaataata gtgggcagcc ctcaactgtg gttgacaaca cactaatggt
      51  cgtcttggct atgacttact ctttgtcaaa gcttggatac gtaggtgaag
     101  accaagccaa tgtgtgtagg tatttagtga atggagatga tttactaata
     151  gccctgcacc ctgaccatga acacattgca gcgaaattga gcgatctttt
     201  cagacagcta ggactcaagt atacatttga atcaaaaact aaagataaga
     251  gtgagctgtg gtttatgtca catagaggag ttcaaataga tggtatgtac
     301  attccaaaac tcgaagaaga gcgaattgta tcaattttgg aatgggatcg
     351  ctcaacggag cccgagcaca ggctggaagc gatttgtgca gcaatggttg
     401  agtcatgggg ttatgaatgg ctaacacatg aaatcagaaa gttctacaat
     451  tgggtactag atcaagagcc ttacaacgag atagcgaggc aaggaaaagc
     501  gccatacatt gcagaaatgg cgttgaagaa gctatacaca tccaaagacg
     551  tgtcagataa cgaactcatg cactttgtgt ctgaatttct aaagatggag
     601  aatctatatg acgaagatct ttgtgtgtat catcaaggag ataatgttct
     651  agatgctggc aatgataagc aggacaaaaa caagggaagc atagtgccta
     701  gtgggagtgg cactgagaag ggtcaaattc agtctgcacc tgacaaagac
     751  ataaacgcag gcacacctgg tatctatgca gttcctaagc taaaagcaat
     801  ttcgaacaag atgcgagtgc caaagtataa gaacaagaac tcaatgaacc
     851  taagcttctt gttaacatat ctaccagatc agatagacat ttcaaacaga
     901  agagccacac atagtcaata tgatgcgtgg tttgaaggtg taaagaagga
     951  ttacgacgtg agtgatgcag aaatggagat tttgcttagc ggattaatgg
    1001  tttggtgtct tgaaaatgga acctcaccag acttaagtgg aacttggaca
    1051  atgatggatg gagaagaaca aagggaatat ccaattaaac cattgattga
    1101  gcacgccaaa ccaacgtttc gccagataat gcatcatttc agcgacgttg
    1151  cagttgctta cattgaaatg cgaaacacaa aaggtccata tatgccaggg
    1201  tacggactaa aacgaaattt gagggatcga agtcttgcat gctacgcatt
    1251  tgacttttac gaaatgactt caaaatcccc agaaagggct aaagaagcac
    1301  atttgcagat gaaagctgca tctctcaaga actcacgcac caaggtcttt
    1351  ggccttgatg gcagtgtcag tagcaaagag gaagacccgg aaaggcatac
    1401  tgtcgaagat gttaaccgtg acatgcacac cctactcggt atgagagggg
    1451  tgtaattgtg aaagatctaa gtagtattac tatttatgta tttctgtttt
    1501  aaaatcttgt tttcctcttt aattcggttt atgtaacatt atagtcagtt
    1551  atgtccatgc attttgatga gggatgttac acatcgttca aattgcacca
    1601  tagctttcat aatattcaca tattctcgac ctattttcaa gtgcttcaaa
    1651  ttagtgatgt cacacatcgt tttgaactat ttgtctatag caagagccaa
    1701  aaaaaaaa