Sequence of DPV Carrot virus Y

Carrot virus Y country Australia polyprotein gene, partial cds.

ACC No: AF203539

Dated: 2002-11-30 | Length: 1754 | CRC: 1626525817

                !!NA_SEQUENCE 1.0
ID   AF203539   standard; RNA; VRL; 1754 BP.
XX
AC   AF203539;
XX
SV   AF203539.1
XX
DT   06-JUL-2000 (Rel. 64, Created)
DT   30-NOV-2002 (Rel. 73, Last updated, Version 3)
XX
DE   Carrot virus Y country Australia polyprotein gene, partial cds.
XX
KW   .
XX
OS   Carrot virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1754
RA   Moran J., van Rijswijk B., Traicevski V., Kitajima E.W., Mackenzie A.M.,
RA   Gibbs A.J.;
RT   "Potyviruses, novel and known, in cultivated and wild species of the family
RT   Apiaceae in Australia";
RL   Arch. Virol. 147(10):1855-1867(2002).
XX
RN   [2]
RP   1-1754
RA   Mackenzie A., Gibbs A.;
RT   ;
RL   Submitted (12-NOV-1999) to the EMBL/GenBank/DDBJ databases.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra 2601, Australia
XX
DR   GOA; Q9ILY3; Q9ILY3.
DR   SPTREMBL; Q9ILY3; Q9ILY3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1754
FT                   /country="Australia: NSW"
FT                   /db_xref="taxon:114923"
FT                   /note="CarVY-NSW"
FT                   /organism="Carrot virus Y"
FT   CDS             <1. .1473
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9ILY3"
FT                   /db_xref="SPTREMBL:Q9ILY3"
FT                   /note="contains partial NIb polymerase and complete coat
FT                   protein sequence"
FT                   /product="polyprotein"
FT                   /protein_id="AAF80971.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMTYSLMCLGYPEEEHDDVCKFLVNG
FT                   DDLLVAFHPDHEHIAGKLSDLFKQMGLKYTFDTRTEDKKELWFMSHKGLMLNGMFIPKL
FT                   EEERIVSILEWDRSSEPAHRLEAICAAMVESWGYDWLTEEIRKFYSWVLDKEPYSEIAK
FT                   QGKAPYISEMALRKLYTSKDVSEGEILRFLNSFEERYVEEDEDIRVFHQGDRIIDAGED
FT                   KEKKDKANPKVGASGSGDKKDDDKGQMVPKNDRDINAGTTGTIAVPKLKAISNKMKVPQ
FT                   YKKKNSMNLEFLLTYLPEQTEISNKRATHSQYESWYEGVKTDYDVSDSEMEVLLSGLMV
FT                   WCLENGTSPDLNGMWTMMDGDEQREYPIKPLIEHAKPTFRQIMHHFSDVAVAYIEMRNT
FT                   KSPYMPGYGLKRNLRDRSLACYAFDFYEMTSRSPERAKEAHLQMKAAALRNSKTRLLGL
FT                   DGSVSGKEEDTERHTVEDVNRNMHTLLGMQGI"
XX
SQ   Sequence 1754 BP; 585 A; 275 C; 409 G; 485 T; 0 other;

AF203539  Length: 1754  January 14, 2003 14:19  Type: N  Check: 680  ..

       1  gggaataata gtgggcagcc ttcaacagtc gtcgataaca ctctgatggt
      51  tgtgttggca atgacatatt ctctgatgtg cttaggttac ccagaagaag
     101  aacatgatga tgtgtgcaag tttttggtaa atggagacga tttgcttgtg
     151  gcctttcatc cagatcatga acatatagcg ggtaaattga gcgatctctt
     201  caaacaaatg ggcctaaaat atacatttga taccagaaca gaagacaaga
     251  aagaattgtg gttcatgtcc cacaaaggat taatgctgaa tggtatgttc
     301  atacctaagt tagaggagga aagaatcgtt tctattttag aatgggatcg
     351  ttcgagtgaa ccagcacata ggcttgaggc aatttgtgcg gctatggtag
     401  aatcatgggg ctatgactgg ttaacggaag agattcggaa attctacagt
     451  tgggttttag acaaagagcc atatagtgag atcgccaagc aaggaaaagc
     501  tccttacatc tcagagatgg cattgaggaa gttgtataca tctaaagatg
     551  tctcagaagg tgaaattcta cgatttctta acagcttcga agaaagatac
     601  gttgaagaag acgaagatat cagggttttt catcaaggag ataggatcat
     651  tgatgctggc gaagacaagg agaaaaagga taaggcaaac ccaaaagtgg
     701  gagcaagtgg atctggggac aagaaagatg acgataaagg acaaatggtt
     751  cctaagaatg atagagacat taacgcagga acaacaggaa cgatcgcagt
     801  acctaaactc aaagcgatat caaacaaaat gaaagttcct caatacaaga
     851  agaaaaattc catgaatttg gaatttcttc taacttattt gcctgagcaa
     901  acggaaattt caaacaagag agcaactcat agtcaatacg aatcatggta
     951  tgaaggagtt aaaactgact atgatgtttc agattccgaa atggaagttc
    1001  tgctaagtgg tttgatggtt tggtgtcttg agaatggtac atcaccagat
    1051  ttgaatggta tgtggacaat gatggacgga gatgaacaga gagaatatcc
    1101  aattaaacca ttaattgaac atgcaaagcc aacttttaga caaataatgc
    1151  accatttcag tgatgttgct gtcgcataca ttgaaatgag aaacacaaag
    1201  agtccataca tgccagggta tggattaaag agaaacctga gagatcgtag
    1251  tttggcgtgt tatgcttttg atttttacga gatgacttct agatctccag
    1301  aaagagctaa ggaagcacat cttcaaatga aagcagcggc tctcagaaac
    1351  tctaagacta ggctacttgg tcttgatggc agtgttagtg gcaaggaaga
    1401  ggacacggag aggcacacgg ttgaggatgt caatcgcaac atgcacactc
    1451  ttttgggtat gcaaggtatt taatgtgtct cggtatttat aaattactat
    1501  aataaggata agtttgtaac atttcctatt atgtgtgttt tcaattcccg
    1551  gtagtttcct tacccttcgg tttatgctat agctaagtaa gcttagttta
    1601  caatggaatt gattagggat gttctacatc gttcttttgc attgtaattc
    1651  taagtatgct tatgcatatt ctcgacctgt ttttaagtgt cttgaatgag
    1701  tgatgttgta catcgtttca agccatttat ctacagcaag agacaaaaaa
    1751  aaaa