Sequence of DPV Beet mosaic virus

Beet mosaic virus polyprotein gene, partial cds.

ACC No: AF203540

Dated: 2002-11-30 | Length: 1609 | CRC: 318847270

                !!NA_SEQUENCE 1.0
ID   AF203540   standard; RNA; VRL; 1609 BP.
XX
AC   AF203540;
XX
SV   AF203540.2
XX
DT   06-JUL-2000 (Rel. 64, Created)
DT   30-NOV-2002 (Rel. 73, Last updated, Version 4)
XX
DE   Beet mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Beet mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1609
RA   Moran J., van Rijswijk B., Traicevski V., Kitajima E.W., Mackenzie A.M.,
RA   Gibbs A.J.;
RT   "Potyviruses, novel and known, in cultivated and wild species of the family
RT   Apiaceae in Australia";
RL   Arch. Virol. 147(10):1855-1867(2002).
XX
RN   [2]
RP   1-1609
RA   Mackenzie A., Gibbs A.;
RT   ;
RL   Submitted (12-NOV-1999) to the EMBL/GenBank/DDBJ databases.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra 2601, Australia
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1609
RA   Mackenzie A., Gibbs A.;
RT   ;
RL   Submitted (01-AUG-2000) to the EMBL/GenBank/DDBJ databases.
RL   Research School of Biological Sciences, Australian National University,
RL   Biology Place, Canberra 2601, Australia
XX
DR   GOA; Q9ILY2; Q9ILY2.
DR   SPTREMBL; Q9ILY2; Q9ILY2.
XX
CC   On Aug 1, 2000 this sequence version replaced gi:8895451.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1609
FT                   /db_xref="taxon:114921"
FT                   /note="BtMV"
FT                   /organism="Beet mosaic virus"
FT   CDS             <1. .1434
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9ILY2"
FT                   /db_xref="SPTREMBL:Q9ILY2"
FT                   /note="contains partial NIb polymerase and complete coat
FT                   protein sequence"
FT                   /product="polyprotein"
FT                   /protein_id="AAF80972.1"
FT                   /translation="VVDNTLMVILAMHYAMHQQCWREEEMKEKIRFFANGDDLLIAIHP
FT                   SKEKFLNVLSEYFHELGLKYDFSSRSTVRETLWFMSHRGLYHDDMYIPKLEEERIVSIL
FT                   EWDRSNEATHRAEAICAAMIEAWGYPELLKYIREFYLWMMHHECYRDLVRDGKLPYIAE
FT                   TALRKLYTDKSVDESELVKYWKALAPEEEDGPDIVTYQGDEKPSKSSQPQSSSPQVPQQ
FT                   VDAGASSQGKDKQSVIKHDSTKSKDVGQSSTAVPRLKQISKMRMPVSKGRQVLALDHLL
FT                   DYKPEQVDLSNTRATREQFDNWYEAVMKEYDVSDSQMGVIMNGLMVWCIENGTSPNLSG
FT                   DWVMMDGEEQVSFPLKPIIENAKPSFRQIMHHFSDAAEAYIEMRNRERPYMPRYGAQRN
FT                   LRDRTLARYAFDFYEVTSRTTDRAREAHFQMKAAALASVSNKLFGLDGSVATTSEDTER
FT                   HTATDVNAHMHHMMGVRQG"
FT   3'UTR           1435. .1609
XX
SQ   Sequence 1609 BP; 494 A; 322 C; 401 G; 392 T; 0 other;

AF203540  Length: 1609  January 14, 2003 14:19  Type: N  Check: 3577  ..

       1  gttgttgaca acactttaat ggttatcctt gcaatgcatt acgcgatgca
      51  tcagcagtgc tggagggaag aggaaatgaa agagaagatt cggttcttcg
     101  caaatggtga tgatctgcta atagctatac atccgagcaa ggagaaattc
     151  ttgaacgtgc tctcagaata cttccacgag cttgggttga aatatgattt
     201  ctcgagcaga agcaccgtgc gcgagacttt gtggttcatg tcacacaggg
     251  ggctttatca tgatgatatg tatatcccta aacttgaaga ggaacgcatc
     301  gtttcaattc ttgaatggga caggagcaat gaagccacac atagagctga
     351  agcaatatgt gctgcaatga ttgaggcatg gggataccca gaacttttga
     401  agtacatccg tgagttttat ctatggatga tgcatcatga atgttatagg
     451  gatctagtgc gtgatggaaa gctaccatat attgcagaga cagctcttag
     501  aaagctctac actgacaaga gcgtggatga gagtgagctt gtcaagtact
     551  ggaaagcact tgcaccagag gaggaggatg gcccggatat agtcacatac
     601  caaggtgatg agaaaccctc aaagtcttca cagccacaga gctcaagtcc
     651  acaagtgcca caacaagttg atgctggagc tagctctcaa ggaaaggata
     701  agcaaagtgt catcaagcac gatagcacaa agagcaaaga tgtgggacaa
     751  tcgagtactg ctgttccaag actgaagcag atctcgaaaa tgaggatgcc
     801  tgttagcaaa ggacgtcaag ttttagcact tgaccatcta ttggattata
     851  agccagaaca ggtcgatctc tcaaacacca gagccacgag ggagcagttt
     901  gacaattggt atgaagcagt catgaaggaa tacgatgtat cagattccca
     951  aatgggtgtg attatgaatg gacttatggt gtggtgtatt gagaatggca
    1001  catcaccaaa tctcagtgga gactgggtca tgatggatgg agaggaacaa
    1051  gtctcattcc ccttgaagcc gataatagaa aatgctaaac catcttttcg
    1101  gcaaataatg catcactttt ctgatgcagc agaagcgtat attgaaatgc
    1151  gcaacagaga aaggccatac atgcctcgtt atggcgctca gagaaatctg
    1201  agagacagaa cgctagctcg ctatgcattc gatttctatg aggtcacctc
    1251  acgaacaact gatcgtgcac gtgaagctca tttccaaatg aaggcggcag
    1301  cgttggcaag cgtgtccaac aagctctttg ggcttgatgg gagcgtggcc
    1351  accacatcgg aggatacaga gaggcacaca gccacagatg tcaacgctca
    1401  catgcatcac atgatgggcg ttaggcaagg ttaattctgt acctcgttct
    1451  atgaatagtt aaatatggta accatttaaa agagtgaggt tttacctccg
    1501  ttgcttattt ctatttcgca tagttccaaa ccactaccct caataggcgt
    1551  ctcatagtga ggttttacct cggaggattc tacggacggt acacaggttt
    1601  acaaaaaaa