Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus - PAV IL coat protein and 17 kDa protein genes, partial cds.

ACC No: AF213147

Dated: 2006-02-27 | Length: 516 | CRC: -1165729091

                
ID   AF213147   standard; genomic RNA; VRL; 516 BP.
XX
AC   AF213147;
XX
SV   AF213147.1
XX
DT   11-JAN-2000 (Rel. 62, Created)
DT   27-FEB-2006 (Rel. 86, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus - PAV IL coat protein and 17 kDa protein genes,
DE   partial cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus - PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-516
RA   Moon J.-S., Allen R.G., Domier L.L., Hewings A.D.;
RT   "Molecular and biological characterization of two Illinois isolates of
RT   Barley yellow dwarf virus-PAV";
RL   Unpublished.
XX
RN   [2]
RP   1-516
RA   Moon J.-S., Allen R.G., Domier L.L., Hewings A.D.;
RT   ;
RL   Submitted (07-DEC-1999) to the EMBL/GenBank/DDBJ databases.
RL   Crop Sciences, University of Illinois, USDA-ARS, 1102 South Goodwin Avenue,
RL   Urbana, IL 61801, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .516
FT                   /db_xref="taxon:12040"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Barley yellow dwarf virus - PAV"
FT                   /serotype="PAV"
FT                   /isolate="IL"
FT   CDS             <1. .510
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9Q2V9"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Q2V9"
FT                   /product="coat protein"
FT                   /protein_id="AAF23493.1"
FT                   /translation="QPNRAGPRRRNGRRKGRGGANPVFRPTGGTEVFVFSVDNLKANSS
FT                   GAIKFGPSLSQCPALSDGILKSYHRYKITSIRVEFKSHASATTAGAIFVELDTACKQSA
FT                   LASYINSFTISRTASKVFRAEAINGKQFQESTIDQFWMLYKANGTTTDTAGQFIITMSV
FT                   SLMTAK"
FT   CDS             <1. .412
FT                   /codon_start=2
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Q2W0"
FT                   /product="17 kDa protein"
FT                   /protein_id="AAF23494.1"
FT                   /translation="NPIEQDPDDEMVDAREEEGQILYLDQQAGLRYSYSQSTTLKPTLP
FT                   GQSNSAPVYRNAQRFQTEYSSPTIVTRSQVSVLSLSHTRPQLRPALSLLNSTPRANNQP
FT                   WLATLIPSQSAGPPQRSSEPKRLTGSNSRNQR"
XX
SQ   Sequence 516 BP; 152 A; 138 C; 120 G; 106 T; 0 other;

af213147 Length: 516  27-FEB-2006  Type: N  Check: 7785  ..

       1  caacccaatc gagcaggacc cagacgacga aatggtcgac gcaagggaag
      51  aggaggggca aatcctgtat ttagaccaac aggcgggact gaggtattcg
     101  tattctcagt cgacaacctt aaagccaact cttccggggc aatcaaattc
     151  ggccccagtc tatcgcaatg cccagcgctt tcagacggaa tactcaagtc
     201  ctaccatcgt tacaagatca caagtatccg tgttgagttt aagtcacacg
     251  cgtccgcaac tacggccggc gctatctttg ttgaactcga caccgcgtgc
     301  aaacaatcag ccctggctag ctacattaat tccttcacaa tcagcaggac
     351  cgcctcaaag gtcttcagag ccgaagcgat taacgggaag caattccagg
     401  aatcaacgat agaccagttt tggatgctct acaaggccaa tggaactacc
     451  actgacacgg caggacaatt cattatcacg atgagtgtca gtttgatgac
     501  ggccaaatag gtagac