Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus - PAV DK1 coat protein and 17 kDa protein genes, partial cds.

ACC No: AF213149

Dated: 2006-02-27 | Length: 516 | CRC: 1997439587

                
ID   AF213149   standard; genomic RNA; VRL; 516 BP.
XX
AC   AF213149;
XX
SV   AF213149.1
XX
DT   11-JAN-2000 (Rel. 62, Created)
DT   27-FEB-2006 (Rel. 86, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus - PAV DK1 coat protein and 17 kDa protein genes,
DE   partial cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus - PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-516
RA   Moon J.-S., Allen R.G., Domier L.L., Hewings A.D.;
RT   "Molecular and biological characterization of two Illinois isolates of
RT   Barley yellow dwarf virus-PAV";
RL   Unpublished.
XX
RN   [2]
RP   1-516
RA   Moon J.-S., Allen R.G., Domier L.L., Hewings A.D.;
RT   ;
RL   Submitted (07-DEC-1999) to the EMBL/GenBank/DDBJ databases.
RL   Crop Sciences, University of Illinois, USDA-ARS, 1102 South Goodwin Avenue,
RL   Urbana, IL 61801, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .516
FT                   /db_xref="taxon:12040"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Barley yellow dwarf virus - PAV"
FT                   /serotype="PAV"
FT                   /isolate="DK1"
FT   CDS             <1. .510
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9Q2V5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Q2V5"
FT                   /product="coat protein"
FT                   /protein_id="AAF23497.1"
FT                   /translation="QPNRAGPRRRNGRRKGRGGANPVFRPTGGTEVFVFSVDNLKANSS
FT                   GAIKFGPSLSQCPALSDGILKSYHRYKITSIRVEFKSHASATTAGAIFIELDTACKQSA
FT                   LGSYINSFTISRTASKVFRAEAINGKEFQESTIDQFWMLYKANGTTTDTAGQFIITMSV
FT                   SLMTAK"
FT   CDS             <1. .412
FT                   /codon_start=2
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Q2V6"
FT                   /product="17 kDa protein"
FT                   /protein_id="AAF23498.1"
FT                   /translation="NPIEQDPDDEMVDAREEEGQILYLDQQAGLRYSYSQSTTLKPTLP
FT                   GQSNSAPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPQLRPALSLLNSTPRANNQP
FT                   WVATLIPSQSAGPPQRSSEPKRLTGRNSRNQR"
XX
SQ   Sequence 516 BP; 153 A; 136 C; 121 G; 106 T; 0 other;

af213149 Length: 516  27-FEB-2006  Type: N  Check: 7440  ..

       1  caacccaatc gagcaggacc cagacgacga aatggtcgac gcaagggaag
      51  aggaggggca aatcctgtat ttagaccaac aggcgggact gaggtattcg
     101  tattctcagt cgacaacctt aaagccaact cttccggggc aatcaaattc
     151  ggccccagtc tatcgcaatg cccagcgctt tcagacggaa tacttaagtc
     201  ctaccaccgt tacaagatca caagtatccg tgttgagttt aagtcacacg
     251  cgtccgcaac tacggccggc gctatcttta ttgaactcga caccgcgtgc
     301  aaacaatcag ccctgggtag ctacattaat tccttcacaa tcagcaggac
     351  cgcctcaaag gtcttcagag ccgaagcgat taacgggaag gaattccagg
     401  aatcaacgat agaccagttt tggatgctct acaaggctaa tggaaccacc
     451  actgacacgg caggacaatt cattatcacg atgagtgtca gtttgatgac
     501  ggccaaatag gtagac