Sequence of DPV Rice black streaked dwarf virus

Rice black streaked dwarf virus segment 10 isolate Hn-S10 64 kDa capsid protein gene, complete cds.

ACC No: AF227207

Dated: 2001-02-25 | Length: 1801 | CRC: 994918626

                !!NA_SEQUENCE 1.0
ID   AF227207   standard; RNA; VRL; 1801 BP.
XX
AC   AF227207;
XX
SV   AF227207.1
XX
DT   06-JUL-2000 (Rel. 64, Created)
DT   25-FEB-2001 (Rel. 66, Last updated, Version 2)
XX
DE   Rice black streaked dwarf virus segment 10 isolate Hn-S10 64 kDa capsid
DE   protein gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; dsRNA viruses; Reoviridae; Fijivirus; Fijivirus group 2.
XX
RN   [1]
RP   1-1801
RA   Fang S., Yu J., Feng J., Han C., Li D., Liu Y.;
RT   "Identification of rice black-streaked dwarf fijivirus in maize with rough
RT   dwarf disease in China";
RL   Arch. Virol. 146(1):167-170(2001).
XX
RN   [2]
RP   1-1801
RA   Yu J., Fang S., Han C.;
RT   ;
RL   Submitted (21-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   2 Yuanmingyuan West Road, Beijing, Beijing 100094, China
XX
DR   SPTREMBL; Q9IHZ5; Q9IHZ5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1801
FT                   /chromosome="segment 10"
FT                   /country="China: Henan Province"
FT                   /db_xref="taxon:10990"
FT                   /virion
FT                   /organism="Rice black streaked dwarf virus"
FT                   /isolate="Hn-S10"
FT                   /specific_host="Zea mays"
FT   CDS             22. .1698
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9IHZ5"
FT                   /product="64 kDa capsid protein"
FT                   /protein_id="AAF81079.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDXYIGIVGKIPGLEVHKLLDKXCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASXTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGAEKAFHLAPVILKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLFKSDRDRLLKKALSANVSSSNTSSHEHVQKIVLNKVTR"
XX
SQ   Sequence 1801 BP; 574 A; 336 C; 327 G; 561 T; 3 other;

AF227207  Length: 1801  December 21, 2001 14:57  Type: N  Check: 8041  ..

       1  aagttttttt cctcacccat aatggctgac ataagactcg acatagcgcc
      51  cgatcttatc cataatggtg taccccagag actttccgat acaataattt
     101  tgaacaaccg accaacaatc actctgctat ctcatttcaa caatctattt
     151  catgaattaa acattgtcaa atcgccccac gttgcatctt cccaaactac
     201  cgttaatttg tacattcgta agcatttgtt gacccgactt catgatagac
     251  tgcaaaccgt agaaactagc actttaccca acatcacgca acttaaagac
     301  catattcgta gcttctttca aaatgaacac caacctattt tccagaccct
     351  aacgaacaac gacctaagcg aagaatttgt aggtgtgact acttttggac
     401  taagtttatt tgctacctcc aaacttgatg ctgaacaaat agaacgtgta
     451  caaattgaga ccctaactga aggaaacatt actttgaagc ctttttccgc
     501  tgatggttta gaagtcattc tcgatgatag ntatattggt atagttggta
     551  aaattccagg tttagaagtt cataaattgc tagataaatg ntgtcgtgaa
     601  gttcctgctc aaatgggaat acttactgat gaagttaaac ttttgatgcg
     651  cactggaaaa ttaagaattg atggtggtta cgattttaat tgtcctgcaa
     701  gcnctacgga tgttacacat tacggtggtt atgaccaatt ttcacgtcaa
     751  atgttcgaac gtttgaatct attttataat attagcctta gcataatccc
     801  cgtttcagct ttgaaaacag ttcatttatt tgaaaaagaa ctaagtgttt
     851  tggatgcaga taaatcttta ctcgaacaaa cttggagcgc agtagcgtca
     901  tttgttgaaa cttggcaggt taaatctaaa gttaaagccg atgatccaga
     951  tgaatatgaa ttgaccagtt tgtccacgtt gcgcactaat tacgatggta
    1001  cctctgcttc tagtcctttc acagataaga aattcattga ttggtacatt
    1051  aagacttttt ctaaaactga gaaaggatcg tcgttgcgtc gaaacgaatt
    1101  agaagagaaa agtgccacta gtacttcaac tacagtaaag aaggttaaaa
    1151  ttcatttctc tgttcaatat tttgatgaat ttaaagttaa cggacatgaa
    1201  aaaagcgttg tagttcaaac tcataaaggc gaaatgacgt tagattatta
    1251  tcgtaaaatt ggcgaagtgt taagtgctat ttggaaacgt ggtaaatctt
    1301  tggctgtacc ttgttttgat tacattaagc ttggcgctga gaaagcattt
    1351  catttagcac ccgtaattct gaagaagtat aatttgacta ttgatgacat
    1401  tatcaacttt attgataaag gaccttctta tttagctaaa ttagacaaga
    1451  ttgatgattg gtctctaatt tcaaagctta tcattaccag cgttttacct
    1501  aacatcattc aagctgttta caaaaccgat ccaagtaata atgttatgaa
    1551  ctcagtaatt atcagtagag cgaacaattt gtttaaatct gatagggaca
    1601  ggctattaaa gaaggcactt tccgccaacg tttcttcttc caacacatct
    1651  agtcatgaac atgtacagaa gatagtatta aacaaagtga caagatgacc
    1701  actgggagta catccttagt gcgactagtt cagtgctgtg cgatcttcag
    1751  ttcattatcg atgccgagtg acgacggcta gggggaaatg cagctattgt
    1801  c