Sequence of DPV Garlic common latent virus

Garlic common latent virus coat protein gene, complete cds.

ACC No: AF228416

Dated: 2001-10-24 | Length: 960 | CRC: -422222725

                !!NA_SEQUENCE 1.0
ID   AF228416   standard; DNA; VRL; 960 BP.
XX
AC   AF228416;
XX
SV   AF228416.1
XX
DT   11-JAN-2001 (Rel. 66, Created)
DT   24-OCT-2001 (Rel. 69, Last updated, Version 2)
XX
DE   Garlic common latent virus coat protein gene, complete cds.
XX
KW   .
XX
OS   garlic common latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Carlavirus.
XX
RN   [1]
RP   1-960
RA   Fajardo T.V.M., Nishijima M., Buso J.A., Torres A.C., Avila A.C.,
RA   Resende R.O.;
RT   "Garlic viral complex: Identification of Potyvirus and Carlavirus in
RT   Central Brazil";
RL   Fitopatol. Bras. 26(3):619-626(2001).
XX
RN   [2]
RP   1-960
RA   Fajardo T.V.M., Nishijima M., Buso J.A., Torres A.C., Avila A.C.,
RA   Resende R.O.;
RT   ;
RL   Submitted (27-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Dept. de Biologia Celular, Universidade de Brasilia, Campus Universidtario
RL   - UnB, Brasilia, DF 70919-970, Brazil
XX
DR   SPTREMBL; Q9DRF6; Q9DRF6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .960
FT                   /country="Brazil"
FT                   /db_xref="taxon:47900"
FT                   /note="isolated from garlic plants"
FT                   /organism="garlic common latent virus"
FT                   /strain="GCLV"
FT   CDS             1. .960
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9DRF6"
FT                   /note="capsid protein forming a flexuous filament virus
FT                   particle; probably expressed by a subgenomic RNA"
FT                   /product="coat protein"
FT                   /protein_id="AAG48242.1"
FT                   /translation="MSVSETEEQRSRRLASERGDAERRKNDAAVRARQDAAIDSEEPAD
FT                   LQETSVNDVDLRQMENRVQEAKRFLERFNKLKKFQADNMTAGEIKNGGFETGRPKLNIA
FT                   ANLRGDTANVFTRPSMDALIALDFKAESLAVATAEDLAAITAKFEQLGVPTERLAPLCW
FT                   SIARYCADTSSSYVADPKGTFEYPGGAITRDAVYAVIKEVTTLRAFCRAFAPVVWNEML
FT                   IAKRPPAGWQTKGYTASTKYAAFDTFDYVLNSACVQPLEGIIRVPTDEETIAHMTNKRI
FT                   AIDRNRRNGRFSSTNSLVTGGMFGKDIKLNFNGSNNAD"
XX
SQ   Sequence 960 BP; 276 A; 188 C; 258 G; 238 T; 0 other;

AF228416  Length: 960  December 21, 2001 14:57  Type: N  Check: 9180  ..

       1  atgtcagtga gtgaaacaga ggaacagaga tcgcgaagac tggcttcaga
      51  gcgaggcgat gctgaacgac ggaaaaatga tgcagcagtg agagctaggc
     101  aggatgctgc aatcgattct gaggaacctg ctgacttgca agaaacgagc
     151  gttaatgatg ttgatctgcg tcaaatggaa aatagggtcc aggaagccaa
     201  gcggtttttg gagcgcttta acaagcttaa gaagttccag gcggacaata
     251  tgacggcagg tgagatcaag aatggagggt ttgaaactgg gaggccaaaa
     301  ctgaacattg cggccaattt gcgtggcgac actgctaatg tatttactag
     351  gcccagcatg gatgctttaa tagcattgga cttcaaagct gaatccttgg
     401  ctgtcgcgac tgctgaagac ctagctgcta tcactgctaa atttgaacag
     451  cttggggtgc caactgagag attagctcca ctttgttggt cgattgcaag
     501  gtactgtgca gatacaagtt cttcatatgt ggctgatccg aaaggaactt
     551  ttgaataccc agggggtgct ataacaaggg acgctgttta tgccgtcatc
     601  aaagaagtta cgactctgag ggctttctgc agagcttttg caccagtggt
     651  ttggaatgaa atgttaatcg ctaaaagacc tcctgctggc tggcaaacca
     701  aaggttacac tgctagtaca aagtatgctg cctttgatac tttcgattac
     751  gtacttaatt ctgcttgcgt ccagccactt gaggggatta tacgggttcc
     801  aactgatgag gagaccatag ctcacatgac caacaaacgg attgctattg
     851  ataggaatag gcgcaatggc cggttttcaa gcacaaacag tttagttact
     901  gggggcatgt tcggtaagga tatcaagcta aatttcaatg gatccaacaa
     951  tgcagactag