Sequence of DPV Turnip mosaic virus

Turnip mosaic virus TU-C5 coat protein (CP) gene, partial cds.

ACC No: AF233890

Dated: 2000-05-02 | Length: 1076 | CRC: -443641577

                !!NA_SEQUENCE 1.0
ID   AF233890   standard; RNA; VRL; 1076 BP.
XX
AC   AF233890;
XX
SV   AF233890.1
XX
DT   02-MAY-2000 (Rel. 63, Created)
DT   02-MAY-2000 (Rel. 63, Last updated, Version 1)
XX
DE   Turnip mosaic virus TU-C5 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1076
RA   Chen T.-M., Chen M.-J., Yeh S.-D.;
RT   "Characterization of coat protein gene of a Turnip mosaic virus isolate
RT   infecting Garland Chrysanthemum";
RL   Unpublished.
XX
RN   [2]
RP   1-1076
RA   Chen T.-M., Chen M.-J., Yeh S.-D.;
RT   ;
RL   Submitted (14-FEB-2000) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Pathology, National Chung Hsing University, Kuo-Kuang
RL   Road No. 250, Taichung 402, Taiwan
XX
DR   SPTREMBL; Q9ICI4; Q9ICI4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1076
FT                   /country="Taiwan"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="TU-C5"
FT                   /specific_host="Brassica juncea"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9ICI4"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAF67165.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 1076 BP; 334 A; 209 C; 286 G; 247 T; 0 other;

AF233890  Length: 1076  December 21, 2001 14:58  Type: N  Check: 2490  ..

       1  gcaggtgaga cgcttgatgc aggtttgaca gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaga
     101  agcagttggc actcaagaaa ggcaaggatg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc cggaacctct ggaactttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctctaaa cctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag ttcgacacat ggtttgaagg
     351  tgtaatggct gattacgaac tgacggagga caaaatgcaa attattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacttcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gttatgaagt tgtatgctgg tagactataa gtatttaagt
     901  ttactcgtta gtattctcgt tatgggaaat atgtaagttt gttaaagcag
     951  ccagtgtgac ttcgtcatgt gtgttgttgt tactttctat attttcgccg
    1001  aatcatttta ttggtgttag cgcatgtggt gaggatcgtc ctcgattgcc
    1051  ttaacatttg ataggatgca agggac