Sequence of DPV Indian peanut clump virus
Indian peanut clump virus L coat protein (ORF1), P40 (ORF2), P46 (ORF3), P14 (ORF4), and P17 (ORF5) genes, complete cds.
ACC No: AF239729
Dated: 2003-05-29 | Length: 4290 | CRC: -469668927
!!NA_SEQUENCE 1.0
ID AF239729 standard; genomic RNA; VRL; 4290 BP.
XX
AC AF239729;
XX
SV AF239729.1
XX
DT 27-MAR-2000 (Rel. 63, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 5)
XX
DE Indian peanut clump virus L coat protein (ORF1), P40 (ORF2), P46 (ORF3),
DE P14 (ORF4), and P17 (ORF5) genes, complete cds.
XX
KW .
XX
OS Indian peanut clump virus L
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pecluvirus;
OC Indian peanut clump virus.
XX
RN [1]
RP 1-4290
RX MEDLINE; 20496662.
RX PUBMED; 11043946.
RA Naidu R.A., Miller J.S., Mayo M.A., Wesley S.V., Reddy A.S.;
RT "The nucleotide sequence of Indian peanut clump virus RNA 2: sequence
RT comparisons among pecluviruses";
RL Arch. Virol. 145(9):1857-1866(2000).
XX
RN [2]
RP 1-4290
RA Naidu R.A., Miller J.S., Mayo M.A., Wesley S.V., Reddy A.S.;
RT ;
RL Submitted (29-FEB-2000) to the EMBL/GenBank/DDBJ databases.
RL Virology, SCRI, Invergowrie, Dundee DD2 5DA, UK
XX
DR GOA; Q9IZ91.
DR GOA; Q9IZ93.
DR SPTREMBL; Q9IZ89; Q9IZ89.
DR SPTREMBL; Q9IZ90; Q9IZ90.
DR SPTREMBL; Q9IZ91; Q9IZ91.
DR SPTREMBL; Q9IZ92; Q9IZ92.
DR SPTREMBL; Q9IZ93; Q9IZ93.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4290
FT /db_xref="taxon:119102"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Indian peanut clump virus L"
FT /serotype="L"
FT /segment="RNA-2"
FT CDS 389. .991
FT /codon_start=1
FT /db_xref="GOA:Q9IZ93"
FT /db_xref="SPTREMBL:Q9IZ93"
FT /note="CP"
FT /gene="ORF1"
FT /product="coat protein"
FT /protein_id="AAF60178.1"
FT /translation="MTTNISEVARGNGHYNVEGWRNHIVRSRANADWWIRSDLYDQLLA
FT DLRAVNFEVNTSRSEVSAIINRVPKDLPAAVSARFPGARGVLGSDTYKEIYFVRIKPEL
FT KQRFLNLIAAADQGKNRDIEVGRPTAPTVTNSAGGNQAIVAQRGVNAVRDTQPMRDGAL
FT HFRYELRDIELAVVDQFDQVIFEDVFKLTWTPAQPGP"
FT CDS 991. .2055
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9IZ92"
FT /gene="ORF2"
FT /product="P40"
FT /protein_id="AAF60179.1"
FT /translation="MDTTFVNTEDVFVAVSPSESAYVGHIHVYRLSTLDKSCYDGSEFV
FT RLLSDFVFVTGVPKTTKRKLQVVGCPLLEGDALTKLYSRLLNYREITNMHGQVMIRLDK
FT PLQDSNGKILSSYVKSVDVFAWSEYGGCDDYHIWSRFVFCTERLVDEPQKLIEGKESAD
FT VKVLKDEIEVLKKQLAACQSPTSTQTPIAPSSETAELTALKNELAECRLKLSACESNLL
FT TVQGLTVDDYKQKWLDLAEKFGAYKEQKDEEIRKLQLNVQEADRKQFIAVQAAIKKEIV
FT AAERAHGKIIEQIRWIKLNATAAKENIFEIKAGRRPLWDTNGVSSLELIEGTADKIMRA
FT GRWWNMPASFVYMP"
FT CDS 2140. .3369
FT /codon_start=1
FT /db_xref="GOA:Q9IZ91"
FT /db_xref="SPTREMBL:Q9IZ91"
FT /gene="ORF3"
FT /product="P46"
FT /protein_id="AAF60180.1"
FT /translation="MCLLLLLFLAMSWQRRDVLGNGALDKEKKKLRSRELKNKDVDRNA
FT ESDYPSEEKVGRKDGHDRVRLGSDNFVGDDPLKVIAEEAVAAGFQATGKVMKRFPADVF
FT EKSKFIGMYDRHLTALREKACCKQERDHVQSKLIQIRQLPPTCSFLAGTITGVPGSGKS
FT TLLKKVQKKLKNSVCLLANKELKGDFAGVPSVFSVEEMLLTAVPSKFNIMLVDEYTLTQ
FT SAEILLLQRKLEAKIVVLFGDREQGNTNKLTSPEWLHVPIVFSSDSSYRFGSETAKFCG
FT DQGFSLQGKGDEDKVVTGDYEGEGEDTEVNLCFTEETKRDLAEVQVEAFLVSSVQGKTF
FT PSVSLFVREGDKQAFSDPHLRLVAITRHRKLLSIRADPEVWISFMFATREGEKVDTHCY
FT GEEHCSHETE"
FT CDS 3335. .3703
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9IZ90"
FT /gene="ORF4"
FT /product="P14"
FT /protein_id="AAF60181.1"
FT /translation="MVKSTVPTRPNKYWPGVVAIGLVALFIFLSISNQKHSTTSGDNIH
FT KFANGGTYRDGSKCITYNRNSPLAYNGSSSNNTLFWLCLLGLSMVWVAFCGYKSLSGQW
FT QSCQHDKRERNYLFECFE"
FT CDS 3546. .4010
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9IZ89"
FT /gene="ORF5"
FT /product="P17"
FT /protein_id="AAF60182.1"
FT /translation="MEVPAITHSSGCACSDCQWSGSLSVDTKVYQDSGRVASMTKEKET
FT TFLSVLSDNLWLFVVAVLMLCVYFVFLSVSRVNPVPMSEFHQDLNGFSMKVVPGAPIDP
FT KVIAAVHHWQKYPFGVNPNANVVVSVIDSIKRGLCMLILCVTLLLYVCYK"
XX
SQ Sequence 4290 BP; 1074 A; 788 C; 1167 G; 1261 T; 0 other;
AF239729 Length: 4290 January 7, 2004 15:41 Type: N Check: 2686 ..
1 gtattcgtgt tctgttgcag tctagcgtaa agcgaaggac gactacagac
51 gataccatcc cttgtatcca aagtgctctt gcttggttcg cgcgtgagtt
101 gcaggaagtt ctttcgagac tggactagtt cctgcctttc tggtacttgc
151 tgcgctttcc ttgtttggca cactaccatt ggtcggtgcc gttgtctgga
201 gtgtgacttc tcgagtgttt ctttcgagac gccttttggc agcgctttga
251 ggagttccac gaaaggtggt ggcaggatcg acctttatct tggtgaccct
301 gacttttgca gcgaggggtt gttactgttt gctctgaagc gcagttttcg
351 ttcgcgacgc tgtttatcag caactgtgct acttgagtat gacaactaac
401 atttccgaag ttgcacgagg caacggtcac tacaacgttg aaggttggcg
451 taatcatatt gttagaagtc gggctaacgc cgactggtgg ataagatctg
501 atttatacga ccaacttttg gcagacctga gagctgtaaa tttcgaggtt
551 aatacatcca ggtcagaggt gtctgctatc attaatcggg ttccgaaaga
601 tttgccggct gctgtgtctg ctaggtttcc tggtgctcgc ggtgtgctcg
651 gttctgatac ttacaaggaa atatattttg tgagaataaa acccgaattg
701 aaacagaggt tcctgaattt gattgctgcg gccgaccagg gaaagaatcg
751 tgatattgag gttggtcgac ctactgctcc tactgttact aatagtgctg
801 gtggcaatca ggcaattgtg gcccagagag gtgtcaatgc agtgagggat
851 actcagccga tgcgagacgg agctctgcac ttcaggtacg agctgaggga
901 tattgaattg gcagttgttg atcagtttga tcaggtcatt tttgaggacg
951 tgttcaagct tacttggact cccgcccagc cggggccttg atggacacga
1001 cttttgtgaa tacggaggac gtttttgtgg ccgtttctcc gtcagaaagt
1051 gcttatgttg gccacattca tgtttatagg ttgtccactc tagataagtc
1101 ttgttacgat ggttctgagt ttgtccgtct tttgtcagat tttgtgtttg
1151 ttactggtgt tccaaaaacg actaagcgca agttacaagt cgtaggttgt
1201 cccctattgg aaggagatgc tttgacaaag ttgtactcca ggctgctaaa
1251 ttacagagag atcactaaca tgcatgggca ggttatgatt cgtcttgata
1301 aaccactgca agattccaac ggaaagattc tgagctctta tgtgaaaagc
1351 gtcgacgtgt ttgcttggtc tgaatatggt ggttgtgatg actaccacat
1401 ttggtcgcgt tttgtgttct gcacggagcg gcttgtagat gagcctcaga
1451 agttgattga aggcaaagag agtgctgatg tgaaggtgct gaaggatgag
1501 atagaggttt tgaagaagca gttggccgct tgccagagcc ctacctcaac
1551 tcagacacct atcgctccgt cttcagaaac tgctgagttg acggcactta
1601 agaatgaact ggcagaatgc cggcttaagt tgtctgcatg tgaaagcaat
1651 ttgttaacag tccaagggtt aactgttgac gattataagc agaagtggtt
1701 ggatcttgcc gaaaagtttg gtgcgtacaa ggagcagaaa gacgaagaaa
1751 tccgtaagct gcaattgaac gttcaggagg ccgacaggaa gcaatttatt
1801 gccgttcagg ccgcgatcaa aaaggaaatt gttgctgcgg agcgggccca
1851 tgggaaaatc attgagcaga ttagatggat taagttgaat gcgactgcag
1901 ctaaggagaa catttttgag atcaaagcag gaaggagacc gctctgggat
1951 acgaatgggg tgagttcctt ggaacttatc gaggggacgg cggataagat
2001 aatgcgtgct ggtcgttggt ggaatatgcc ggcgtctttt gtgtatatgc
2051 cttagtttgt tttattgttt tgttttttgt ttgtgtttag gtttggtttt
2101 acacgtgtgt ttttcaactt ttgtgtgttg tttttgttta tgtgcttgtt
2151 attgttactg tttttggcaa tgtcttggca aaggagggat gtgttgggta
2201 atggtgccct tgacaaggaa aagaagaaat tgcgctcaag agagttgaag
2251 aacaaggatg tggaccggaa tgcagaaagt gactacccgt ctgaagagaa
2301 agttggacga aaggacggtc acgaccgagt gaggcttggc tctgataatt
2351 ttgtcggtga cgatcctctg aaagtgatcg ctgaggaggc ggtcgctgct
2401 ggttttcaag ctacgggaaa ggttatgaaa agattcccag cggatgtttt
2451 tgaaaaatca aaatttattg gcatgtatga caggcatctt acagctctgc
2501 gtgagaaggc gtgttgcaag caggagcgtg atcatgtgca gtcgaaactg
2551 attcagattc gtcaacttcc tcctacatgc tcatttttgg caggtactat
2601 cactggtgtc ccaggttctg ggaaaagtac actgctgaag aaagtgcaga
2651 agaagttaaa aaattctgtc tgtctgctag cgaataagga gttgaaagga
2701 gacttcgctg gtgtaccatc cgtattttct gttgaggaaa tgttactgac
2751 cgccgtccct tcaaaattta atatcatgtt ggtggatgag tatacgttga
2801 ctcaaagtgc tgaaatcttg cttcttcaga gaaagttgga agctaagatt
2851 gttgtattgt ttggagacag ggagcaaggc aacaccaaca agcttacaag
2901 tccggagtgg ttgcacgtac ctattgtgtt ttcgagtgac tcgagttaca
2951 ggtttggtag tgaaactgcc aaattctgtg gtgaccaggg tttttcactg
3001 caaggcaagg gtgatgaaga taaagttgtg acgggtgatt acgaaggcga
3051 aggggaggac actgaggtga acctttgctt tactgaagaa actaagaggg
3101 atttagcgga agtgcaagtt gaagccttcc ttgtttcgag tgttcaagga
3151 aagacattcc caagcgtttc cttgtttgtg cgggaaggag ataagcaagc
3201 tttttcagat ccgcatttgc gcttggtggc aatcacgaga cataggaagc
3251 ttttaagcat tagggctgat cccgaggtct ggattagttt catgttcgca
3301 actagagagg gagagaaagt agacactcat tgctatggtg aagagcactg
3351 ttcccacgag accgaataag tattggcctg gtgttgtagc tataggactt
3401 gtggccttgt tcatatttct gtctatatct aaccaaaagc actccactac
3451 ttctggtgat aatatacata agtttgcaaa cggcggaaca tatcgagacg
3501 gttccaagtg tatcacatat aacaggaatt cacctttagc ctataatgga
3551 agttccagca ataacacact cttctggttg tgcttgctcg gattgtcaat
3601 ggtctgggtc gctttctgtg gatacaaaag tctatcagga cagtggcaga
3651 gttgccagca tgacaaaaga gaaagaaact acctttttga gtgttttgag
3701 tgataatctt tggttgtttg ttgttgctgt tcttatgcta tgtgtgtact
3751 ttgtgtttct aagtgtgagt cgtgtgaatc ctgtacctat gtctgagttt
3801 caccaggatt tgaatggctt cagtatgaaa gtggtgcccg gggcacctat
3851 agatcctaaa gtcatcgcgg ccgttcatca ctggcaaaag tacccttttg
3901 gcgtcaatcc taatgccaac gttgtcgtta gtgtgataga tagtattaag
3951 cgtggtttgt gtatgcttat attatgtgtg acgcttttgt tatatgtttg
4001 ttacaaatga agaaaacata aaaatgatta aaccgagtct gatcaactcg
4051 gggcggtgcg agccatagag cacggttgtg ggtttaaact aaaaaccctc
4101 tagtctcgct tcctagctat tacaaggtta attgcaaaaa cccttgtatc
4151 tggctatgat ggaggtgccg gcaagatgtc gggagtgtca agacacgaca
4201 cttagtggct ggcgtagact gctggtgcgc gaactcatag agttcgcgta
4251 ggtgcaaatc ccccgctgaa acggagcgat atccatccca