Sequence of DPV Aquareovirus C

Grass carp hemorrhagic virus segment M5 inner capsid protein VP4 gene, complete cds.

ACC No: AF251262

Dated: 2000-10-02 | Length: 2239 | CRC: -1311073143

                !!NA_SEQUENCE 1.0
ID   AF251262   standard; RNA; VRL; 2239 BP.
XX
AC   AF251262;
XX
SV   AF251262.1
XX
DT   02-OCT-2000 (Rel. 65, Created)
DT   02-OCT-2000 (Rel. 65, Last updated, Version 1)
XX
DE   Grass carp hemorrhagic virus segment M5 inner capsid protein VP4 gene,
DE   complete cds.
XX
KW   .
XX
OS   Grass carp hemorrhagic virus
OC   Viruses; dsRNA viruses; Reoviridae; Aquareovirus;
OC   Grass carp hemorrhagic virus group.
XX
RN   [1]
RP   1-2239
RA   Qiu T., Lu R., Zhang J., Zhu Z.;
RT   "Complete nucleotide sequence of grass carp reovirus segment M5";
RL   Unpublished.
XX
RN   [2]
RP   1-2239
RA   Qiu T., Lu R., Zhang J., Zhu Z.;
RT   ;
RL   Submitted (03-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Department of Fish Genetics and Breeding, Institute of Hydrobiology,
RL   Chinese Academy of Sciences, Luo Jia Shan, Wuhan, Hubei 430072, China
XX
DR   SPTREMBL; Q9E5Y9; Q9E5Y9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2239
FT                   /db_xref="taxon:128986"
FT                   /note="segment: M5"
FT                   /organism="Grass carp hemorrhagic virus"
FT                   /strain="873"
FT   CDS             18. .2204
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9E5Y9"
FT                   /product="inner capsid protein VP4"
FT                   /protein_id="AAG17627.1"
FT                   /translation="MITIVVIPTAHFSWTDTNFLNSVDYRLTSQPKIRDRFAVYAPGWL
FT                   RRQLDEFSASLTASELLQALQTIPIPVKARCLLLPKPKRFAQWLLDVPSANIWHIPVTT
FT                   LCATVASKHPSSDVYNYIPDHVPPNAEFDTVTRRVAAGRDIYVRSTKVIGAPLCLAAPA
FT                   KYCAGYLSTHQLDGIYPENWAPDNFHKREFCLTILPSLLGPRTFLLDVDADRDASYPLS
FT                   VLWPQLRALALKSRLLLPPVALLRRVVDPGLKPTWSADSDAAFRALRLSRPSSASKPVG
FT                   FDFSALPVVDIICLLESEPDDHGRIAPGTRLTIHSVPTDLLTSLSIQEGVRYPLRQESG
FT                   MFVHWVLLALLMSDDVTISGTRRSVKLETAHASARPFVHITVERCASARIIDVRGSPAM
FT                   YANAVCLTLPKGSYKSTIIDTLPAMFSDLPILEQAAVIDSDALGDSLRPSFETQFLERL
FT                   ENLDPNLLDRAVASILSPTSDTSDDAVTTVLDAFNALYREIMTPAQRARLPLLTQQGRV
FT                   LAFAHSDYELLSANIPIQVVRGSILIDHVVNLLARRNRVGGTALQVLLDYCYRTQASPL
FT                   APTPAGRLYKQLFGPWLMVPRLSEPLIKLRLVASAPAKVLRAAGWTIDGDPPLEVSCLC
FT                   AYVTDRAAATALIERRLDSRALVTVGGDQLMFVEYAPPLPLVSIPRTFLLPVTYVVHWV
FT                   SPQRVLLNGGNVSFTSGLEWTFDDDPQVVTSTGV"
XX
SQ   Sequence 2239 BP; 423 A; 715 C; 498 G; 603 T; 0 other;

AF251262  Length: 2239  December 21, 2001 14:58  Type: N  Check: 8056  ..

       1  gttatttgta gccaaggatg atcaccattg tggttattcc aacagcccac
      51  ttctcatgga ccgataccaa ctttttaaac tctgtcgatt accgactcac
     101  ttcacaacct aaaatcagag atcgcttcgc tgtttatgcc cctggttggc
     151  ttagacgtca gttggacgag ttctccgcct cccttaccgc ttctgaactc
     201  cttcaagccc ttcaaacaat tccaatccct gttaaagctc gatgcctcct
     251  tctgcctaag cccaagcgct ttgcacagtg gctacttgac gttccctctg
     301  ctaatatttg gcatatccca gtgaccactc tttgcgcgac tgtagcgtcc
     351  aagcatcctt cctcagacgt ctataactac attcccgatc acgtaccacc
     401  gaacgccgaa ttcgataccg tcacccgtcg cgttgctgcc ggccgtgata
     451  tctatgtccg atcgaccaag gttattggcg ctcctctctg tctagctgcc
     501  cccgccaaat attgcgccgg ttatctctcc actcaccaac ttgacggtat
     551  ttatcccgaa aactgggcac ctgataattt ccacaaacgt gaattctgtc
     601  tcactatcct gccctccctc ctcggaccga gaacgttttt gctcgatgtc
     651  gacgccgacc gcgatgcctc gtatccacta tctgtgctct ggccacaact
     701  gcgtgccctc gccctcaaat ctagattact actacctcca gtggcgctgt
     751  tacgccgtgt tgtcgaccct ggactcaaac ccacttggtc tgctgatagt
     801  gacgcggctt ttcgagctct acgattatct cgcccatcct ctgcctccaa
     851  gccggttggt tttgattttt ctgcccttcc agtcgttgac atcatctgcc
     901  ttcttgaatc agaacccgac gatcacggtc gaattgcccc cggaacaagg
     951  ctcaccattc actccgtacc tactgatcta ctaacctccc tctccattca
    1001  agagggcgtc cggtatcccc tacgacagga aagtggtatg ttcgtgcact
    1051  gggtactact ggctctattg atgtctgatg acgtcaccat ttccggcact
    1101  cgtcggtctg tgaagctgga gactgctcac gcgtcggctc gtcctttcgt
    1151  ccacatcact gtcgagcgtt gtgcttcagc tcgtatcatt gacgtgcgcg
    1201  gttcccccgc tatgtacgcc aacgcggtat gccttaccct acctaagggt
    1251  tcgtataagt ctacgatcat cgatacatta ccggccatgt tcagtgatct
    1301  gcccattctc gagcaggctg cggtcattga ctccgacgct ttaggagact
    1351  ctcttcgtcc ctcattcgaa actcaattcc ttgaacgttt ggaaaacctc
    1401  gacccgaatc tccttgatcg tgccgtcgcg tctattctta gcccgacaag
    1451  cgacacctcc gacgacgctg tcacgaccgt gctcgacgct ttcaacgccc
    1501  tctaccgcga aatcatgacc cctgcccaac gcgctcggtt accattgctt
    1551  actcaacagg gtcgcgttct ggcctttgcc cactccgatt atgagctcct
    1601  gtccgccaat attcctattc aagtggtccg aggatccatc ctgatagacc
    1651  atgttgtcaa tttgctcgca cgtcgcaatc gggtgggtgg cacggctctg
    1701  caagttctgc ttgactactg ttaccgcacg caggcgtcac cactggcccc
    1751  aacgcccgct ggccgattat acaaacagct ttttggtcca tggttgatgg
    1801  tgcctcggtt gtctgagcct ctaatcaagc tacgtctagt ggcctcggcc
    1851  cctgctaagg tgttacgagc cgcgggttgg acgattgatg gtgatccccc
    1901  attggaggtg tcctgcctat gtgcgtacgt cacggaccgt gccgcagcaa
    1951  ccgccctcat agaacgtcgg cttgactcac gtgccctggt caccgttggg
    2001  ggagatcagc tcatgttcgt agaatacgcg ccgccccttc ccctggtttc
    2051  tatcccccgc acgttccttc tgcctgtcac ttacgttgtc cactgggttt
    2101  ccccgcagcg cgtgctactg aacggtggta acgtgtcctt taccagtggg
    2151  cttgagtgga cctttgatga tgatcctcag gttgtcacct cgaccggggt
    2201  ttgagcaggt cgaggagtcc tgacgctacg ccgatcatc