Sequence of DPV Potato virus Y
Potato virus Y isolate PVY-NBR polyprotein gene, partial cds.
ACC No: AF255660
Dated: 2001-05-30 | Length: 1325 | CRC: -704648010
!!NA_SEQUENCE 1.0
ID AF255660 standard; RNA; VRL; 1325 BP.
XX
AC AF255660;
XX
SV AF255660.1
XX
DT 02-JAN-2001 (Rel. 66, Created)
DT 30-MAY-2001 (Rel. 67, Last updated, Version 2)
XX
DE Potato virus Y isolate PVY-NBR polyprotein gene, partial cds.
XX
KW .
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1325
RA Inoue-Nagata A.K., Fonseca M.E.N., Lobo T.O.T.A., de Avila A.C.,
RA Monte D.C.;
RT "Analysis of the nucleotide sequence of the coat protein and
RT 3'-untranslated region of two Brazilian Potato virus Y isolates";
RL Fitopatol. Bras. 26(1):45-52(2001).
XX
RN [2]
RP 1-1325
RA Inoue-Nagata A.K., Fonseca M.E.N., Lobo T.O.T.A., de Avila A.C.,
RA Monte D.C.;
RT ;
RL Submitted (13-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology, EMBRAPA Cenargen, PQEB Final W5 Norte, Brasilia, DF
RL 70770-900, Brazil
XX
DR SPTREMBL; Q9DQN4; Q9DQN4.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1325
FT /country="Brazil"
FT /db_xref="taxon:12216"
FT /organism="Potato virus Y"
FT /strain="tobacco veinal necrosis"
FT /isolate="PVY-NBR"
FT /specific_host="potato"
FT CDS <1. .999
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9DQN4"
FT /product="polyprotein"
FT /protein_id="AAG44633.1"
FT /translation="YSWLLQQQPFSTIAQEGKAPYIASMALKKLYMNRTVDEEELKAFT
FT EMMVALDDEFECDTYEVHHQGNDTIDTGGSTKKDAKQEQGSIQPKLNKEKEKDVNVGTS
FT GTHTVPRIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQ
FT LAYDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLR
FT QIMAHFSDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREA
FT HIQMKAAALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT mat_peptide 1. .195
FT /note="NIb"
FT /function="polymerase"
FT /product="nuclear inclusion b protein"
FT mat_peptide 196. .996
FT /note="capsid protein; CP"
FT /product="coat protein"
FT 3'UTR 1000. .1325
XX
SQ Sequence 1325 BP; 418 A; 234 C; 318 G; 355 T; 0 other;
AF255660 Length: 1325 December 21, 2001 14:58 Type: N Check: 7755 ..
1 tactcatggt tgttgcaaca gcaacctttt tcaacgatag cacaggaagg
51 aaaagctcca tacatagcga gcatggcatt gaagaagctg tacatgaata
101 ggacagtaga tgaggaggaa ctgaaggctt tcactgaaat gatggttgcc
151 ttggatgatg aatttgagtg cgatacttat gaagtgcacc atcaaggaaa
201 tgacacaatc gatacaggag gaagcactaa gaaggatgca aaacaagagc
251 aaggtagcat tcaaccaaaa ctcaacaagg aaaaggaaaa ggacgtgaat
301 gttggaacat ctggaactca tactgtgcca cgaattaaag ctatcacgtc
351 caaaatgaga atgcccaaga gtaaaggtgc aactgtacta aatttggaac
401 acttactcga gtatgctcca cagcaaattg acatctcaaa tactcgagca
451 actcaatcac agtttgatac gtggtatgaa gcagtacaac ttgcatacga
501 cataggagaa actgaaatgc caactgtgat gaatgggctt atggtttggt
551 gcattgaaaa tggaacctcg ccaaacatca acggagtttg ggttatgatg
601 gatggagatg aacaagtcga atacccactg aaaccaatcg ttgagaatgc
651 aaaaccaaca cttaggcaaa tcatggcaca tttctcagat gttgcagaag
701 cgtatataga aatgcgcaac aaaaaggaac catatatgcc acgatatggt
751 ttagttcgta atctgcgcga tggaagtttg gctcgctatg cttttgactt
801 ttatgaagtt acatcacgga caccagtgag ggctagagag gcacacattc
851 aaatgaaggc cgcagcttta aaatcagctc aatctcgact tttcggattg
901 gatggtggca ttagtacaca agaggaaaac acagagaggc acaccaccga
951 ggatgtttct ccaagtatgc atactctact tggagtgaag aacatgtgat
1001 tgtagtgtct ttccggacga tacatagata tttatgtttg cagtaagtat
1051 tttggctttt cctgtactac ttttatcgaa attaataatc gtttgaatat
1101 tactggcaga taggggtggt atagcgattc cgtcgttgta gtgaccttag
1151 ctgtcgtttc tgtattatta tgtttgtgta aaagtgccgg gttgttgttg
1201 ttgtggctga tctatcgatt aggtgatgct gcgatttgtc gtagcagtga
1251 ctatgtctgg atttagttac ttgggtgatg ctgtgattct gtcatagcag
1301 tgactgtaaa cttcaatcag gagac