Sequence of DPV Sunflower chlorotic mottle virus

Sunflower chlorotic mottle virus capsid protein gene, partial cds.

ACC No: AF255677

Dated: 2001-02-14 | Length: 1873 | CRC: 1442576479

                !!NA_SEQUENCE 1.0
ID   AF255677   standard; RNA; VRL; 1873 BP.
XX
AC   AF255677;
XX
SV   AF255677.1
XX
DT   05-JUL-2000 (Rel. 64, Created)
DT   14-FEB-2001 (Rel. 66, Last updated, Version 2)
XX
DE   Sunflower chlorotic mottle virus capsid protein gene, partial cds.
XX
KW   .
XX
OS   Sunflower chlorotic mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1873
RA   Dujovny G., Sasaya T., Koganesawa H., Usugi T., Shohara K., Lenardon S.L.;
RT   "Molecular characterization of a new potyvirus infecting sunflower";
RL   Arch. Virol. 145(11):2249-2258(2000).
XX
RN   [2]
RP   1-1873
RA   Dujovny G., Sasaya T., Koganesawa H., Usugi T., Shohara K., Lenardon S.L.;
RT   ;
RL   Submitted (13-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Virology, IFFIVE-INTA, Cno 60 Cuadras, Km 51/2, Cordoba 5119, Argentina
XX
DR   SPTREMBL; Q9IG06; Q9IG06.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1873
FT                   /db_xref="taxon:129732"
FT                   /virion
FT                   /organism="Sunflower chlorotic mottle virus"
FT   CDS             <1. .1623
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9IG06"
FT                   /product="capsid protein"
FT                   /protein_id="AAF79179.1"
FT                   /translation="GSRFDSSLTPYLINAVLAIRATYMEDWDIGYQMLQNLYTEIVYTP
FT                   ISTPDGTVVKKFRGNNSGQPSTVVDNSLMVVLAMHYAFVKECIDFEEIDECCKFFVNGD
FT                   DLLIAVNPEKEDMLDRFSDHFSSLGLNYDFSSRTKHKEELWFMSHRGLEIEGMYIPKLE
FT                   EERVVSILQWDRAEQPEHRLEAICAAMIEAWGYPDLIHQIRRFYSWLLEKQPFATLAEE
FT                   GKAPYIANMALRKLYLDRTVDNSELHEFRKLFVELDDEFECGTYEVHHQGDNIDAGKDQ
FT                   KDEKKDDKNKQVASTASKDAAKSKDVNAGTSGTHTIPRIKSITPKMRMPKSKGAIVLNL
FT                   DHLLEYTPQQVDISNTRATQSQFDTWYAAVQQAYDISESEMPTVMNGLMVWCIENGTSP
FT                   NINGTWVMMEGSEQVEFPLKPVIENAKPTFRQIMAHFSDVAEAYIEMRNKKEPYMPRYG
FT                   LVRNLRDMSLARYAFDFYELTSQTSVRAREAHIQMKAAALKSAQTRMFGLDGGIGTKEE
FT                   NTERHTTEDVSPNMHTLLGVRNM"
XX
SQ   Sequence 1873 BP; 600 A; 351 C; 419 G; 503 T; 0 other;

AF255677  Length: 1873  December 21, 2001 14:58  Type: N  Check: 2546  ..

       1  ggatcccgat ttgacagctc attaactcca tacctcataa atgcagtctt
      51  ggcaattcga gcaacttaca tggaggattg ggatattgga tatcaaatgt
     101  tgcagaactt gtacacagaa attgtgtata ccccaatctc aacaccagat
     151  ggaacagttg tcaagaaatt cagaggcaac aacagcggac aaccatccac
     201  agttgttgac aattccttga tggttgtgct tgcaatgcat tatgcatttg
     251  tgaaagaatg catcgatttt gaggaaatag atgaatgttg caagttcttt
     301  gtcaacggag atgatttgtt gatagctgtc aatccagaga aggaagacat
     351  gcttgataga ttttcagacc acttctcatc cttaggctta aactatgatt
     401  tctcatccag gacaaaacac aaagaagaat tatggtttat gtctcataga
     451  ggtcttgaaa ttgaaggcat gtacattcca aaattggaag aggaacgtgt
     501  ggtgtctatc ttgcaatggg acagagcaga acaacctgaa caccgactag
     551  aagctatatg tgcagcaatg attgaggcgt ggggctatcc tgatttgatc
     601  catcagattc gcagattcta ttcatggtta cttgagaagc agccgtttgc
     651  aacacttgct gaagaaggga aggcccctta tattgcgaac atggctttaa
     701  gaaaattgta cttggataga acagttgaca atagtgaact ccacgagttt
     751  agaaaattat ttgtcgaatt ggatgacgaa tttgagtgtg gaacgtatga
     801  agtgcaccat caaggtgaca acatagatgc aggaaaagac cagaaagacg
     851  agaagaagga tgataaaaac aagcaagttg catccacagc tagtaaagat
     901  gctgcgaagt caaaagatgt caacgctggc acttcaggaa cacacacaat
     951  accccgtatc aaaagcataa caccaaagat gagaatgcca aaatcaaagg
    1001  gtgctatagt tttgaatcta gatcatttgc tcgagtacac tccacaacag
    1051  gttgacatat caaatactcg cgcaactcaa tctcaatttg atacttggta
    1101  tgcagcagtt caacaagcat acgacatcag tgagagcgag atgccgacag
    1151  tgatgaatgg acttatggtt tggtgcattg aaaatggaac ctcgccaaat
    1201  attaacggca cttgggtgat gatggaagga agtgagcaag tcgagttccc
    1251  actcaaaccc gttattgaaa atgcaaaacc gacgttcaga caaatcatgg
    1301  cacacttctc tgatgtcgca gaggcgtata tcgaaatgcg caacaaaaag
    1351  gaaccgtata tgccacgata cggtttagtt cgaaatttgc gagacatgag
    1401  tttagctcgt tatgcgttcg acttttatga actcacgtct caaacttcag
    1451  tccgagctag agaagcgcac atacaaatga aagcagctgc tttaaaatca
    1501  gcgcaaacac gtatgtttgg attggatggt ggcattggta caaaagagga
    1551  aaacacagaa agacacacca ccgaggatgt cagccccaac atgcatactt
    1601  tgcttggggt tcgtaacatg tgatcatgtg tctactggga tgaaatataa
    1651  ctatcgtatg caatatatat tttggctttt cctgtactac ttttattacg
    1701  tctttacagt atttcatatt ccaagcaata ggaagtgact ttgtgatttc
    1751  gtcatgaagg tagtttctat ttcttcttgt atctgtttta gattatataa
    1801  gagttccggg ttgttttcga gggtgatgtt gtgattccgt catagcagtg
    1851  atcgcagatc tcaatcagga gac